Gene Sdel_1488 details

Gene Information

• Locus tag: Sdel_1488
• ID: 8593028
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurospirillum deleyianum DSM 6946
• Kingdom: Bacteria
• Replicon accession: NC_013512
• Strand: -
• Start bp: 1510238
• End bp: 1513708
• Gene Length: 3471 bp
• Protein Length: 1156 aa
• Translation table: 11
• GC content: 46%
• Product: methionine synthase
• Protein accession: YP_003304540
• Protein GI: 268680109

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.128181
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCAACAC TTCAAGAACT TATATCTGAA AAAATTTTAA TTATCGACGG TGCGATGGGT 
ACGCAGATTC AAGCTTTGCA GATTCCTTTA GAAAAATGGG AAGGCAAAGA GGGATGTAAC 
GAGCTGTTAA ACGTTACATG TAAAGATGAA ATTTCAAAGA TTCATCGTGG CTATTTATTA 
GCAGGTGCAG ACATTATCAA GACCAACACC TTTGGGGCTT TGCCGTGGGT TTTGGATGAT 
TATGGCATTG GGGATCGAAC CTATGAACTC GCCCGTACAG GTGTGGAAAT TGTCAAAGAG 
GCGTGTTTGG CGTTTTCGAG TGAAGATAAG CCTCGTTTTT GTGCCGCCGC TTTTGGACCT 
GGAACCAAAC TTCCATCCTT AGGGCACATC GGTTACGATG AAATGTATGC GGGGTACAGG 
GTTGCTGCAA CAGGTGCCAT TGAGGGTGGA TGCGACGTCT TTCTCATCGA AACGGCGCAA 
GACCCGCTTC AAATTAAAGC CGCCCTTCAC GCCATTTTTG ATGCTCAAAC ATCTTTACAT 
GTAAAGCTTC CCGTGATGGT TTCCGTGACC ATAGAACTCA GTGGCACAAT GCTTATTGGA 
ACCGATGCGA CAACGATAGC GACTATCCTT GAACCGTTTG ATATTATGAG TTTAGGCTTT 
AACTGTGGTA CAGGGCCTGA GCAGGTTGAA AAGCATGTCA AAACGCTTAG TTCCGTTTGG 
TCAAAGCCCA TCAGTGTCCA TGCCAATGCA GGACTGCCTC AAAATAGGGG AGGCTATACC 
TTTTATCCGA TGGGACCTCG TGAGTTTGCA GAGCTTCAAG AAAAATTTAC GCAAATTGCA 
GGGGTTGCTA TTTTGGGGGG ATGTTGTGGA ACAACGCCTC AGCATATTTT AGAACTCTCT 
AAACGGGTAG AGGGGAAAAA ACTGCTTGCA CCTCAGGGTG AAATGGCTAG AAGTATCGCT 
TCTCTTTTTG AAGTAAGAGC GCTCAAGCAA GACCCAGCTC CTTTTCTCAT CGGCGAGCGA 
AGCAACGCCA CAGGCTCAAA AGCGTTTCGT GAACTTTTAT TGGCGGAAGA TTACGATGGC 
ACGCTCAGCG TGGCACAGCA ACAAGTACGC AGTGGCGCAC ATGGGATTGA TGTGAGTGTG 
GGCTTTGCAG GACGAGATGA GATCAAAGAT ACCACAGCAG TTGTGGGACG CTATGTTCAA 
AAAATTCTTT TACCACTTAT GCCTGATACC ACGCAAGTTC CAGCATTAGA ATGTGCCTTA 
AAATTGATTG GCTCGAAGCC TATTATTAAC TCTGTAAATC TTGAAGATGG CATTGAAAAG 
TTTGACAAAG TCTGCTCTTT GGCCAAGCGC TTTGGGTGTG CGTTGGTGTG CCTCACCATC 
GACGAGCAAG GCATGGCAAA AACCAAAGCG CAAAAAGTAG CGATTGCGGA GCGCATTTTT 
CAGCTTGCGA CCACAAAGCA TGGCATTAAC GCAGGGGATT TGGTCTTTGA CTTACTTACG 
TTTACGGTAG GCAGTGGAGA CGCTGAGTAC CACACGGCGG CGATTGAAAC CATCGAAGCG 
ATACGTGAAT TTCACGCGAT GCACCCTGAG GTGGGCTTTG TTTTGGGCAT CTCGAATATC 
TCTTTTGGTT TAGCCAAACA CGCTCGTGAA TACCTAAACT CTGTCTTTTT GCACCACTGT 
GTGGAAGCGG GTTTAAGCAT GGCGATTGTG AATGTTAAAA ACACGCTTCC GATGCACAAA 
ATTAGCGATA TTGATAAAAA AGTGTGTGAA GACTTACTCT TTAATCGAAG GGAAGAGGGT 
GACCCACTTT TTAAATTTAT TTCGCATTTT GAAGGTGTGG TGGAGAACAA AGACGAGAGT 
GACGCCGCAT ATCTTGCGAT GAGCACGAAA GAAAAAATTG CCACCTTGCT CATTGATGGC 
GATAAAGAGC GCATGCTTGC TCTCTTGCCT ACCGCAAAAG AGGAAATTGC CGCAGAAGTC 
ATTGTCAATG AGATTTTAAT TGATGCGATG AAGGTGGTGG GAGAGCTTTT TGGAAGTGGA 
AAGATGCAGC TGCCTTTTGT GCTTCAATCG GCTGAAGTGA TGAAAGCTTC GGTGGATTAT 
TTGCAACCGT ATTTACCAAA AACAGAAAAA AGTACCACCA CGACGTTGAT TATTGGAACG 
GTGAAGGGTG ATGTGCATGA CGTGGGGAAA AACCTTGTGG ATATCATTCT AAGTAACAAC 
GGTTTTAAGG TCGTGAACAT CGGTATTAAG GCGGATTTGG AGCAGTTTTT AGAAGCGCTG 
AAAGAGCATA AAGCCGATGC CATCGGTATG AGCGGGCTTT TGGTGAAATC GACCAATGTC 
ATGAAAGAAA ACCTAGAAGC GATGCAGAAG ATGGGTCTTA ATATTCCTGT TATTTTGGGC 
GGTGCGGCGC TGACCGATAA CTTTGTGGAA GACTTTTGCC GTCCCATTTA TGAAGGACCC 
ATTTTTTACT GTAAAGATGC CTTTGAGGGC ATAACGGCGA TGAGTCGCAT CGAGGCGAAA 
AATTACGATA CCGATTTTGG GCGTAAAGTC TTAGAAAATG CGGTCGTAAG AGCCAACAAA 
GAAACCAAAG AAATACCACC GTTTTCTGAG ATTAAAATGC CAAGCCGTGA GCTAAAAATC 
CCCACACCGC CATTTTGGGG TAGACGGGTG TTAAAAACGG ACGTGAAAGA GTTGGCGTAC 
TCGTGGATCA ACCACAAAAT CCTTTTTGCG CAACGTTGGG GCTACAGTGG CAAAGGGCAA 
AGCAAAGAAG AGAAGCAAAA GCAACTCGAT GAGGTGCTTT ATCCGACCTA TGAGCGTGTC 
AAAGCGGATA TTGAGCGCTT AGGGTTGTTT GAGCCAACCC TCATTTACGG GTATTACCCC 
GCACGCTCAC ATGAAAATAA ACTCTATCTT TTTGATGAGA GTGAGGGGTA CTTTAGTAAG 
GAACAGGTGT GTCGTGAGCG CGTCGACGTG GTTGCCAAAC GGGCGCTTAA AACCTTTGAT 
TTCCCTCGTC AAAATAGAAA TCCCTACCGA AGTTTGAGCG ACTTTATCGC TCCTGATCGT 
CACGATGTTT TAGCGCTGAC GTGTGTGAGT GCTGGGGCGA AGTTTTCAGC GTATGAAAAA 
GAGTTGTACG ATGCGGGCAA TTTTAAGGAG TACTTTTTTG TGCATGGTTT AGGGGTGGAA 
CTTGCCGAAG CACTCGCCGA AATCGTACAC AAGCAAATAC GCCTAGACTT AGGCGTAGCC 
CAGCATGAAG GGCATAGTTT GCGTGATGTG CAGATGAAAC GCTACCACGG GTGTCGTTAC 
TCTTTTGGCT ATCCTGCGTG TCCAAATTTG GAAGACACCA GAGTGATTTT TGATTTGCTC 
AAGCCTGAAG AGTTTGGGAT TGAGCTTAGT GAGACGTTTC AGATTCACCC CGAACAAAGT 
ACCACAGCGA TTGTGATGCA CCACAAAGAG GCGCTTTACT TTAACGTCTA A 

 

Protein sequence

MATLQELISE KILIIDGAMG TQIQALQIPL EKWEGKEGCN ELLNVTCKDE ISKIHRGYLL 
AGADIIKTNT FGALPWVLDD YGIGDRTYEL ARTGVEIVKE ACLAFSSEDK PRFCAAAFGP 
GTKLPSLGHI GYDEMYAGYR VAATGAIEGG CDVFLIETAQ DPLQIKAALH AIFDAQTSLH 
VKLPVMVSVT IELSGTMLIG TDATTIATIL EPFDIMSLGF NCGTGPEQVE KHVKTLSSVW 
SKPISVHANA GLPQNRGGYT FYPMGPREFA ELQEKFTQIA GVAILGGCCG TTPQHILELS 
KRVEGKKLLA PQGEMARSIA SLFEVRALKQ DPAPFLIGER SNATGSKAFR ELLLAEDYDG 
TLSVAQQQVR SGAHGIDVSV GFAGRDEIKD TTAVVGRYVQ KILLPLMPDT TQVPALECAL 
KLIGSKPIIN SVNLEDGIEK FDKVCSLAKR FGCALVCLTI DEQGMAKTKA QKVAIAERIF 
QLATTKHGIN AGDLVFDLLT FTVGSGDAEY HTAAIETIEA IREFHAMHPE VGFVLGISNI 
SFGLAKHARE YLNSVFLHHC VEAGLSMAIV NVKNTLPMHK ISDIDKKVCE DLLFNRREEG 
DPLFKFISHF EGVVENKDES DAAYLAMSTK EKIATLLIDG DKERMLALLP TAKEEIAAEV 
IVNEILIDAM KVVGELFGSG KMQLPFVLQS AEVMKASVDY LQPYLPKTEK STTTTLIIGT 
VKGDVHDVGK NLVDIILSNN GFKVVNIGIK ADLEQFLEAL KEHKADAIGM SGLLVKSTNV 
MKENLEAMQK MGLNIPVILG GAALTDNFVE DFCRPIYEGP IFYCKDAFEG ITAMSRIEAK 
NYDTDFGRKV LENAVVRANK ETKEIPPFSE IKMPSRELKI PTPPFWGRRV LKTDVKELAY 
SWINHKILFA QRWGYSGKGQ SKEEKQKQLD EVLYPTYERV KADIERLGLF EPTLIYGYYP 
ARSHENKLYL FDESEGYFSK EQVCRERVDV VAKRALKTFD FPRQNRNPYR SLSDFIAPDR 
HDVLALTCVS AGAKFSAYEK ELYDAGNFKE YFFVHGLGVE LAEALAEIVH KQIRLDLGVA 
QHEGHSLRDV QMKRYHGCRY SFGYPACPNL EDTRVIFDLL KPEEFGIELS ETFQIHPEQS 
TTAIVMHHKE ALYFNV