Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sdel_1289 |
Symbol | |
ID | 8592829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurospirillum deleyianum DSM 6946 |
Kingdom | Bacteria |
Replicon accession | NC_013512 |
Strand | + |
Start bp | 1305600 |
End bp | 1307450 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | arginine decarboxylase |
Protein accession | YP_003304344 |
Protein GI | 268679913 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00657697 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGATTATG GTATTAAAAC GTGGGGAAAC GACAACTTCT TTATTGAAGA TGGTAAAGTA AAAGTCAATA CAGGGTGTGA ACCCTCTTTG ATGGAGATTA TTCAAGAAAT TCGAAAAGAT GGCATTCGAG GTCCCATTTT ACTTCGGTTC CCACATCTAA TCCAAAAACA GATTCGCATG ATTTACAAAA GTTTTTCGGA TGCGAAAAGA GAGTTTAATT ACGAGGGAAG TTTTAATGCG GTCTACCCTC TTAAAGTCAA CCAATTTCCC AACTTTGTCA AAAACCTTGT CTCTTTAGGC CAAAAATATA ACTACGGTCT TGAGGCAGGT TCCAAAGCAG AGTTGCTTCT AGCCATGGCA TACAACAATC CTAATGCGCC CATTACGGTG AATGGTTTTA AAGATAACGA GATGATTTCT TTAGGGTTTA TCGCTGCGGA GATGGGACAT AACATCACCC TTACGATTGA AGGTATTAAT GAGCTTGAGA GTATTATCTC TATCGCAAAA GATCGTTTTG GATGTGTGCC TAACATTGGT CTTCGTATTC GCCTGCATAG CTCAGGCATT GGTATTTGGG CAAAAAGTGG AGGAATTAAC TCTAAATTTG GGTTAACCTC CACGGAGCTT TTAGAAGCGG TCAATATGAT TCGTGATGCC AATTTACTTG AAAAATTTAC GATGATTCAT TTTCATATTG GCTCACAAAT TACTGATATC GCGCCATTAA AAAAAGCACT AAGAGAAGCG GGAAATATCT ATGCAGAACT TTGCCGTATG GGGGCAACCA ATCTTAGAGC AATCAATCTT GGCGGTGGTT TGGCGGTGGA GTATTCTCAA CATAAAACAA CCCTACATAA AAACTACTCT TTAAGTGAAT ATGCCAATGA CGTTGTCTAT CTTTTAAAAG ATATTGCTAA TCGTAAAAAT GTTTCAGAAC CTGATATTTT TATTGAATCA GGTCGCTTTG TTGCGGCGCA CCATGCCGTT TTAGTCGCCC CCGTTTTAGA GCTTTTTTCA CAAGAATATA CCGATCAAAA GTTGCATCTC AAAGAGAACA ACCCTCCTCT CATTCAAGAA TTATTTGATT TATTTAACAC CATGAATCGA AAAAATGCCC TCGAATTTTT GCACGATAGT ATTGATCATA TGGAATCACT ACTCACTCTT TTTGATTTGG GTTATATTGA TTTACAAGAC CGTTCAAACA CAGAAATTTT GGTCAATCTC ATTATTAAAA AAGCGGTAGG ATTGATTGCC GATAAAAAAT TAAATGAGAT TTTAGACATT CAAGACCGTG TGCAAGAGCG TTATTTAGTC AATTTCTCAT TGTTCCAAAG TCTGCCTGAT TTTTGGGGCA TTGAGCAAAC ATTCCCTGTC ATGCCTTTGG ATAGGCTCGA TGAAACACCC ACACGATCGG CTTCTTTATG GGATATTACC TGCGATAGCG ATGGTGAAAT TGGCTTTAAC ACCGAAACCC CTCTCTTCTT ACACGATGTA GATATTAAAA ATCGTGACTA CTTTTTGGGC TTTTTCTTAG TAGGAGCTTA TCAAGAAGTT TTAGGAATGA AACACAACTT GTTTACCCAT CCAACAGAAG CCACTGTCAT CATTGATGAT GATGGATTTG AAATTCAAAA CATGCTGGAA TCTCAAAGCA TTAGCGATAT TTTAGAAGAC CTTGATTATG ACATCAGAGA GGTGCAAGAA AACCTTAATG AGCGTATTGA AGCCTCTGAT ATTATCAGCG AAAAAGAGAA AAAATATATT TTAGGTGAAA TTTATCTTTT CTTAAATGAC AATGGATATC TAAAAACCAT CAATAGCAAT GAAGGCGTAA ACTATGAGTA A
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Protein sequence | MDYGIKTWGN DNFFIEDGKV KVNTGCEPSL MEIIQEIRKD GIRGPILLRF PHLIQKQIRM IYKSFSDAKR EFNYEGSFNA VYPLKVNQFP NFVKNLVSLG QKYNYGLEAG SKAELLLAMA YNNPNAPITV NGFKDNEMIS LGFIAAEMGH NITLTIEGIN ELESIISIAK DRFGCVPNIG LRIRLHSSGI GIWAKSGGIN SKFGLTSTEL LEAVNMIRDA NLLEKFTMIH FHIGSQITDI APLKKALREA GNIYAELCRM GATNLRAINL GGGLAVEYSQ HKTTLHKNYS LSEYANDVVY LLKDIANRKN VSEPDIFIES GRFVAAHHAV LVAPVLELFS QEYTDQKLHL KENNPPLIQE LFDLFNTMNR KNALEFLHDS IDHMESLLTL FDLGYIDLQD RSNTEILVNL IIKKAVGLIA DKKLNEILDI QDRVQERYLV NFSLFQSLPD FWGIEQTFPV MPLDRLDETP TRSASLWDIT CDSDGEIGFN TETPLFLHDV DIKNRDYFLG FFLVGAYQEV LGMKHNLFTH PTEATVIIDD DGFEIQNMLE SQSISDILED LDYDIREVQE NLNERIEASD IISEKEKKYI LGEIYLFLND NGYLKTINSN EGVNYE
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