Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sdel_1288 |
Symbol | |
ID | 8592828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurospirillum deleyianum DSM 6946 |
Kingdom | Bacteria |
Replicon accession | NC_013512 |
Strand | + |
Start bp | 1304380 |
End bp | 1305588 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | |
Product | histidyl-tRNA synthetase |
Protein accession | YP_003304343 |
Protein GI | 268679912 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.373559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTAATG CTTTACGTGG AATGAAAGAT ACACTATCCC CTGAAAATGA AGTGTATGAC TATATTATAA AGACGTGTAC ACGCATCGCA CACCGCTATG GATTTTCATT GATTGAAACG CCTATCTTAG AAGAGACCGC ACTCTTTAAA CGCAGTGTTG GAGAGAGCAG CGATATTGTA GGTAAAGAGA TGTACCAATT TAGAGACAAA GGGGACAATG ATGTCTGTTT GCGTCCTGAG GGTACCGCAG GTGTGGTTAG AGCGTTTATT CAACAAAAAT ATGACAAAGC AGGTGGCACA AGACGCTTCT TTTATCATGG ACCTATGTTT CGTTATGAGA GACCTCAAAA AGGACGTTTA CGCCAATTTC ACCAATTTGG TGTAGAAAGT TTTGGCGAAG CGGATGTCAG AGAAGATGCA ACGATTATTT TAATGCTTAA AACAATGTTA GATGCTTTAG ACATTGGGTA TAGCTTGGAA ATCAACTCCC TAGGATGCCC CTCTTGTATG CCAACATATC GCTCAAAGTT AGTCACTTTT TTAGAAAACA CGGAAGGCTT ATGCGAGGAT TGCGAACGAA GAAAACTTAC CAATCCTATT CGTGTATTGG ATTGTAAAAA TGAACACTGT AAAACCTTGC TCAAAAATGC ACCGTTAATT ATTGAGCATT TATGCCTTAC ATGTAAAGAA GATTTTGAGA CATTAAAACG TATTTTAGAC ACATTTGAGA TCTCCTACCA CGTCAATCCA AAATTGGTTC GAGGGTTGGA TTATTATTCT AAAACAGCTT TTGAATTTGT CAGTTCTGAA ATTGGCGCAC AAAGCGCTAT TGCAGGAGGT GGACGTTATG ATAGGTTGGT TGAGTTTTTA GATGGTAAAG CCACACCTGC GGTAGGATTT GCGATGGGAA TTGAGCGTTT GATGGATTTA GTCAAGATGC CAGAACCAAC ACGTGAGGGA TATTATATCG GTGCTTTGTG TGATGAGGCT CTAGATGTCG TTTTTAGACT GGTAGAGACT AAGCGCCTTG AAGCAAAAGT TTTAACCCAT TATGAGGCAA AATCACTGAA AAATCATCTT AAACTAGCCG ATAAAAATGA AGCAAAATTT TGCGTGTGCA TTGGAGAAGA TGAACTGGCT AAGAACACGG TTTGGATTAA AGATTTAGAG AGTAAAGAAG AAAAAATTAT CGCTATGGCA CAATTTTAA
|
Protein sequence | MINALRGMKD TLSPENEVYD YIIKTCTRIA HRYGFSLIET PILEETALFK RSVGESSDIV GKEMYQFRDK GDNDVCLRPE GTAGVVRAFI QQKYDKAGGT RRFFYHGPMF RYERPQKGRL RQFHQFGVES FGEADVREDA TIILMLKTML DALDIGYSLE INSLGCPSCM PTYRSKLVTF LENTEGLCED CERRKLTNPI RVLDCKNEHC KTLLKNAPLI IEHLCLTCKE DFETLKRILD TFEISYHVNP KLVRGLDYYS KTAFEFVSSE IGAQSAIAGG GRYDRLVEFL DGKATPAVGF AMGIERLMDL VKMPEPTREG YYIGALCDEA LDVVFRLVET KRLEAKVLTH YEAKSLKNHL KLADKNEAKF CVCIGEDELA KNTVWIKDLE SKEEKIIAMA QF
|
| |