Gene Sdel_1273 details

Gene Information

• Locus tag: Sdel_1273
• ID: 8592812
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurospirillum deleyianum DSM 6946
• Kingdom: Bacteria
• Replicon accession: NC_013512
• Strand: -
• Start bp: 1287580
• End bp: 1289766
• Gene Length: 2187 bp
• Protein Length: 728 aa
• Translation table: 11
• GC content: 34%
• Product: PAS sensor protein
• Protein accession: YP_003304329
• Protein GI: 268679898

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTAT TAAAAATTGT AATTGTTTTA TTTTTTTATA CTTCATTCCT TCATGCCAAT 
GAGATTTTAT TGCTTCATTC GTATAATAAA GGATTGAAAT GGAGTGATGG TATCTCTAAA 
GGTGTTGAAG ATGAGATGAA AAAACATCCT CAATTTGAGC TGACGACTGA ATATATGGAT 
AGCAAGAAGA TAGAATCTGA AAACTATCTT GAGGAATTGC TGATTTTATA TCGAAAGAAA 
TTTTCTCAGC GTCGCTATAA AGCGATTATT GCCGCAGATA ATTATGCGTA TGAATTCGCA 
CTTAAGTATC ACCAAGAACT TTTTGTGGAT ACCCCTGTGA TTTTTTGTGG GGTGGAAAAT 
TTTAATCCTA AAGATATCAC ACCTTATCAT AAACCTTATT TTACAGGTGT GGTGGAATAT 
AAAGATATTC GTAAAAATTT AGAACTGATT TATCAGCTTT TTCCTGCAAC AAAAATGGTT 
TATATTATCA GTGATGATGC ATACTCTTCG TTGGTGATTA AAGATCAGAT TATTGAGGAG 
TCCAATTTTT TTAAAGATAA GTTTAGAGTG GTGTTCGATA ATCAGATTGA TTTTAATGCG 
ATTGATGAAA AAATTAACAA ACTTCCTAAA CAGAGTGTTA TTTTGTTTAC CAGTTTTTAC 
CGTGATATGT ATGGGAGTTA TGTTCCCTAT CACAAACTTC AAGAATTTTT TCAACGCTCC 
AAATTTCCTG TTTTTGCGTT AAATCACATA CATCTTAATG AAGGTATTAT TGGTGGGTTT 
GTGGTCAACC CTTATGAACA AGGTTCGATG GCGGTTAAAA AAGCGTTTGC GTTGATTCAA 
GGACGAGCGA TTCGTACTTT GCCTGTTGAT ATTCCTGTGG GTACCTATGC CTTTGATAAT 
CATGTCCTAC GTAAATTTGG TATTCCTTTA AGTGATGTTC CTTCTCCCTC GGAGGTGATT 
AATGGGGTGG AGAGTTTTTA TGAAAAGCAT CAAAAATTTG TGGAGAATGC TTTTGCCTTA 
ATGCCTCTTT TGCTGCTATT GACAACTATT TTGATTTTAA ATGTCATCAA ACGGATTTCT 
CTTGAAAAGG AGCTTTTACG TCAAAATAAA TTAGACCATG TGCTTTTAAA TAACATCCAA 
AGTGCTATTT TTTGGAAAGC AAATGACGGA AAAATACTCG GATGTAATGA TCTTTTATGT 
GAAATTTTAC AGCGTGATCG TTTTGATATT ATTGGAAAGC ATGTTAAAGA GATTATGCCA 
GATATCTGCG ATAGAATTCA AGAAGTACCC TTAGATAGTC CAGAAAGTGC TGAAATTGAA 
ATGGAAATTC CTTATAAAGA GAAAAAAATC TTTTCAGCAA GAAGAACGTA TTATACCGAT 
GAAAAAAATC ACGAAGCGGG TGTTGTTACG ATTTTGACGG ATATTACAGA GAAAAAACGT 
ATTGACACGG AGCGAAAGCG TCACGAACAA TTTGTGATTC AGCGTTCCAA ACAGTCTGAA 
GTGGGAGAGA TGATAGCTAG TATCGCACAT CAGTGGAAAA CGCCTTTGGT TGAAATCTCA 
GCCATTGCTC AGGAACTTAT TTATAAACGA CGTAAAAAAG TCTTAGATGA AGAAGATACG 
CAAAAATTTG TGGATGATAT TATGACGCAA GTGAAATACA TGTCTAACAC CATTGACGAT 
TTTAGGCAAT TCATCAAACC TTCTACGAAA AAGACACTTT TTAATGTGCG TGAGGCGGTT 
GATGCGCTGT TAAATGTTCT AAATCACAGT GTAAAATACA ACTATATCAC CCTTTCGATT 
CTTCAAAAAG AGCACGAAGC GCTTTTAGCG TTTGGGTATC CTAATGAATT TAAACAGTGT 
GTTTTAAACA TCATTAATAA TGCAAAAGAT AGTATTATAA AAAAAAGAGA GACAAAGCCA 
ACAGAAGGTA TGATAGAGAT TGAAATTAAA AGTGACGAGC ATTACATCTA TTTGGATATC 
AGTGATGATG GATGTGGCAT TGAGAAGAAG AATTTAGAGA GTATTTTTGA TCCTTTTGTG 
AGTACCAAAG CAAATGGTGA TGGATTTGGC TTGTATATGG CTCGTTTGAT TATTGAAGAT 
AAAATGGGCG GAAAAATTAT CGCTAAACAG AGAGAAAATG GTGCGCAAAT TTGTATTACG 
GTTAAAAAAG CCAAAGGAGA TGCATGA 

 

Protein sequence

MNLLKIVIVL FFYTSFLHAN EILLLHSYNK GLKWSDGISK GVEDEMKKHP QFELTTEYMD 
SKKIESENYL EELLILYRKK FSQRRYKAII AADNYAYEFA LKYHQELFVD TPVIFCGVEN 
FNPKDITPYH KPYFTGVVEY KDIRKNLELI YQLFPATKMV YIISDDAYSS LVIKDQIIEE 
SNFFKDKFRV VFDNQIDFNA IDEKINKLPK QSVILFTSFY RDMYGSYVPY HKLQEFFQRS 
KFPVFALNHI HLNEGIIGGF VVNPYEQGSM AVKKAFALIQ GRAIRTLPVD IPVGTYAFDN 
HVLRKFGIPL SDVPSPSEVI NGVESFYEKH QKFVENAFAL MPLLLLLTTI LILNVIKRIS 
LEKELLRQNK LDHVLLNNIQ SAIFWKANDG KILGCNDLLC EILQRDRFDI IGKHVKEIMP 
DICDRIQEVP LDSPESAEIE MEIPYKEKKI FSARRTYYTD EKNHEAGVVT ILTDITEKKR 
IDTERKRHEQ FVIQRSKQSE VGEMIASIAH QWKTPLVEIS AIAQELIYKR RKKVLDEEDT 
QKFVDDIMTQ VKYMSNTIDD FRQFIKPSTK KTLFNVREAV DALLNVLNHS VKYNYITLSI 
LQKEHEALLA FGYPNEFKQC VLNIINNAKD SIIKKRETKP TEGMIEIEIK SDEHYIYLDI 
SDDGCGIEKK NLESIFDPFV STKANGDGFG LYMARLIIED KMGGKIIAKQ RENGAQICIT 
VKKAKGDA