Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sdel_1089 |
Symbol | |
ID | 8592627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurospirillum deleyianum DSM 6946 |
Kingdom | Bacteria |
Replicon accession | NC_013512 |
Strand | - |
Start bp | 1107247 |
End bp | 1109484 |
Gene Length | 2238 bp |
Protein Length | 745 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | |
Product | isocitrate dehydrogenase, NADP-dependent |
Protein accession | YP_003304148 |
Protein GI | 268679717 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.911582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACACA CACCCCATAA GATTATTTAT ACGCAAGTAG ACGAAGCACC CGCACTTGCA ACCTATTCCC TTTTGCCTAT TATTAAGGCA TTTGTCAAAC GCTCTTCCAT TAAGATTGAG ACACGTGATA TCTCTTTATC AGGGCGTATT TTGGCACATT TTTCCGATTA TCTAACAAAC GAACAACGGG TCAATGATGA TTTGGCGTAT TTAGGAACGT TAGCAAATAC GCCTGAGGCA AATATCATCA AACTACCCAA TATCAGCGCT TCATTACCTC AATTAAACGC AGCGATTAAA GAGCTACAAG ATAAAGGATA TTTGATTCCT TCGTATCCTG AAAATCCAGC CAATGAAAAA GAACAAGAGA TTAAAGCACG TTATGCAAAA GTTTTAGGAA GTGCGGTGAA TCCTGTGCTT CGAGAAGGAA ATTCTGATAG ACGAGCGCCC TTGTGCGTCA AAGAGTATGT TCGTAAAAAT CCACATCGCA TGGGTGAATG GCATCAAAAC TCCCGATCCC ACGTGGCATA TATGCACGAG GGTGATTTTT ATGGTAATGA AAAATCTATC ACGATGGATA AAGCAACCAC GCTTCGCATT GAACTGCTCT CTTCTGAGGG TAAAACAACC GTTTTAAAAG AGAAGCTAGA GCTATTGGAG GGTGAAATTA TTGATGGCAC ATATATGAGT GCCTCTAAAT TAGCACAGTT TTATGAAACT CAAATGGAAG AGGCAAAAGC TCAAAATCTT TTACTCTCCT TGCATCTTAA AGCAACCATG ATGAAGGTGA GTGATCCTAT TATGTTTGGT TATGCGGTGA AAACATATTT TAAAGAGGTG TTTGAGAAAT ACGCAGCGAC TTTTGAGCGA TTGGGTGTGA ATGCTAACAA TGGTTTGGGT GATGTTTACG CCAAAATAGC CACCTTGCCT GAGAGAGAAA AAAATGCGAT AGAAGCAGAT ATTGAGGCAT GTTATACCAA ACGAGCTTCG CTTGCGATGG TCAACTCCGA TAAAGGTATT ACCAATTTAC ATGTACCCAG CGATGTGATT ATTGATGCGT CTATGCCAGC ATGTATTCGA GAATCAGGCA AAATGTGGGG AAAAGATGGT GCTCTACACG AGACAAAAGC ATTGATTCCT GATCGTGCTT ATGCGCGCAT TTATGAAGAA ACGATGAATT TTTGTAGACA AAATGGCGCA TTGGACCCTA AAACAATGGG TTCCGTACCC AATGTGGGCT TAATGGCACA AAAAGCTGAA GAGTACGGCT CTCACGACAA AACATTTGAG ATTCCTTATG CGGGTGTGGT GCGTATGGTG GAGAGTGAAA ATGGTGCAGT GTTGATGGAA CATAGGGTTG AAAAAGGGGA TATTTACCGT GCGTGTCAAG CCAAAGATGC ACCGATTCGT GATTGGGTTA AATTGGCGAT TTCTCGTGCG AGGCTGAGTC AGACCCCAGC GATTTTCTGG TTAGATGATA AGCGTGCGCA TGATGCGCAA ATGATAAAAA AAGTAGAACA CTATCTTAAA GCGTATGATT TAAGTGGGCT TGATATTAAA ATTATGAGTC CAGAAGATGC GATCAAGCTC TCTTTAGAGC GCATTGTGAA AGGGCTTGAT ACTATTGCGG TAACAGGCAA TGTATTGCGT GATTATTTGA CCGATTTGTT TCCAATTTTA GAAGTGGGTA CCAGTGCGAA AATGCTCTCG ATTGTGCCTT TAATGAAGGG TGGAGGATTG TTTGAAACAG GTGCGGGTGG CTCTGCTCCT AAACATGTTC AGCAGTTCGT GGAAGAGAAC CATTTACGAT GGGATTCTTT GGGTGAATTT ATGGCACTGA GCGCATCTTT AGAGCATTTA AGTACAGTTA TGGGAAATAA ACAAGCGGCA ATTTTAGCTA AAACGCTCGA TAGTGCGACA GGAAAAGTAT TGGATGAAAA AAAATCTCCT TCTCCTAAGG TAGGTGAATT GGATAATCGA GGAAGCCATT TCTATTTAGC GCTTTATTGG GCGGAAGCAT TGTCACAACA AGATGATGAT GAAAACCTTG CTATTGCGTT TCAACCGCTT GCAGAAGCTT TGCGTGTGAA TGAAAAAACG ATTGTAGAAG AGTTAAATAG TGTACAAGGT AAGAGGGTTG ATTTAGGGGG ATATTATAAA TTGGATGTTG AAAAAGTCAA TAAAGCCATG CGTCCAAGTC CAACGTTTAA TCACGCTTTA GAGATTTTTA ATGCTTAG
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Protein sequence | MAHTPHKIIY TQVDEAPALA TYSLLPIIKA FVKRSSIKIE TRDISLSGRI LAHFSDYLTN EQRVNDDLAY LGTLANTPEA NIIKLPNISA SLPQLNAAIK ELQDKGYLIP SYPENPANEK EQEIKARYAK VLGSAVNPVL REGNSDRRAP LCVKEYVRKN PHRMGEWHQN SRSHVAYMHE GDFYGNEKSI TMDKATTLRI ELLSSEGKTT VLKEKLELLE GEIIDGTYMS ASKLAQFYET QMEEAKAQNL LLSLHLKATM MKVSDPIMFG YAVKTYFKEV FEKYAATFER LGVNANNGLG DVYAKIATLP EREKNAIEAD IEACYTKRAS LAMVNSDKGI TNLHVPSDVI IDASMPACIR ESGKMWGKDG ALHETKALIP DRAYARIYEE TMNFCRQNGA LDPKTMGSVP NVGLMAQKAE EYGSHDKTFE IPYAGVVRMV ESENGAVLME HRVEKGDIYR ACQAKDAPIR DWVKLAISRA RLSQTPAIFW LDDKRAHDAQ MIKKVEHYLK AYDLSGLDIK IMSPEDAIKL SLERIVKGLD TIAVTGNVLR DYLTDLFPIL EVGTSAKMLS IVPLMKGGGL FETGAGGSAP KHVQQFVEEN HLRWDSLGEF MALSASLEHL STVMGNKQAA ILAKTLDSAT GKVLDEKKSP SPKVGELDNR GSHFYLALYW AEALSQQDDD ENLAIAFQPL AEALRVNEKT IVEELNSVQG KRVDLGGYYK LDVEKVNKAM RPSPTFNHAL EIFNA
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