Gene Sdel_0897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSdel_0897 
Symbol 
ID8592431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurospirillum deleyianum DSM 6946 
KingdomBacteria 
Replicon accessionNC_013512 
Strand
Start bp891917 
End bp892639 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content45% 
IMG OID 
ProductCRISPR-associated protein Cas6 
Protein accessionYP_003303963 
Protein GI268679532 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000104953 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATATT TTGAACTGAG ATGCGTAGCA TATTTGAAAA AAGAGATGGC TTTTGAGCGT 
AGTTTTGAGG CGCTTTCCAA ATACATCAGC TTTAGCATGT ACCAAGAAGG AGAAGGCGAA
GTCCACCAAA AAGAGGGCTT CAAATATTAC GTTTTTAGCG GCTTTAAGCC CAAAGACGAG
GACATTCAAA AGAAAGCTTA CCGAGGCGGT GAAACGTACC CCTTTACCAT TCGCTCCCTC
GATGAAACGC TCATCGACAC ACTTTCAACT TCGCTGCGCC AAAACATCAA CAATGAAAAT
CTCCTTGTCG TCGAAGCTCA TAAAAAAACC ATTTCCCAGT TTTTCATCAC CGAACTCTAC
AGCGCCACCC CCGTCATCGT CTCGGTAAGC AACGGCAAAT ACTGGACCAT GAACGAAAGC
GGCGACATCG TCCAACTCCA ACGTCAACTC CACGAAAACG CCGAAAAAAA ATACCAAAGC
TTCTTCGGGG AGTCTTTACA TGTAAACCAA AATTTCATCC AACTCATCGA AATCAAAAAC
AAAGTCCCCC AAAATATCCT CATCACCAAA GAAGGCAAAT CCATCCGCTT TTTTGGCAAT
AAATTTAGGA TTGTGCCTAA TGAAGATGAG GTGAGTCAGA AGTTGGCGTT TGTTGCGTTG
GCTTGTGGGG TTGGGGAGAA GAATAGTTAT GGGGCCGGGT TCTGTGTGGG TGGTCGTGTA
TGA
 
Protein sequence
MRYFELRCVA YLKKEMAFER SFEALSKYIS FSMYQEGEGE VHQKEGFKYY VFSGFKPKDE 
DIQKKAYRGG ETYPFTIRSL DETLIDTLST SLRQNINNEN LLVVEAHKKT ISQFFITELY
SATPVIVSVS NGKYWTMNES GDIVQLQRQL HENAEKKYQS FFGESLHVNQ NFIQLIEIKN
KVPQNILITK EGKSIRFFGN KFRIVPNEDE VSQKLAFVAL ACGVGEKNSY GAGFCVGGRV