Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sdel_0715 |
Symbol | |
ID | 8592248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurospirillum deleyianum DSM 6946 |
Kingdom | Bacteria |
Replicon accession | NC_013512 |
Strand | + |
Start bp | 712521 |
End bp | 713876 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | |
Product | outer membrane porin |
Protein accession | YP_003303785 |
Protein GI | 268679354 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0142723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTGG TTAAACTTAG CGTGGCGGCT TTCGTAGTTG CTGGACTTGC GTCTAGCTTA TTCGCAGCAG ATACACTTGC TGATGCCTTC AAGAATGGAA AAGTAACCGG TGAATTAAGG GCTTGGTATT TTGATCGAGA TACCGATGAT AAAAATGATG GAACACTTGC CAAAGGTGAT GCCGACATTT TTTCAACAGG TTTGATGCTC AGTTACGTTA CAGACTCTTT GTATGGGTTA AGTTTAGGTA CAACCTTTCA AGGAAACTAT GCTCCTTTTG CGAACAGTGA CGCAAAAAAT CTTTACGCAA CCGATATGTA CGGTTCAGGA GCCGTCCTCT CCGAAGCCTA TATGACGTAT ACACTAGGAA AAACAACGGC TAAAGTAGGT CGTCAGTTTA TTGCCAGTCC CTTGGTCAAT AGCTCTGGCT CACGTATGAT AAAAGAGGCG TTTCAAGCCG CCGTACTTAT CAACACAGAT ATCCCCAACA CAACCTTGGT TGCTGGATAT TCGGATAAGT TTCAAGGTAG AACGTCTGAT TATGATAGAA GTGTAGACGG TTCGGACTCA CAAATGCCTA GCTTTAAAAA AGAAGCAGTC TTTTACGGAG CGGGTACATC AAGAGGTTCA TTAGGCTCAC CAGCAGGGGC TTCAAACGTT TTTGGATTTG ATGGGGCATA CACGGCTGCT GTGATTAACA AATCTATCAC CAATGTGACA TTAACAGGTC AATACCTCTT TGTGAACGAT GTGGAAGGAA CCAACGGTGG CGATGCCAAT GTTTTCTATG CGGAGGGTAA TTATGCGTTG CCTTTAAGCA GTATGAAATT GCTTTTAGAT GCGACCTATC GTGGTTCAAG AACGTCGAAT GCTACTTTTG ATAGTTTCCA TGCTGAGGGC GATATGTATC AAGGACGTGT TGGATTTAGC GAGCTAGCAG GCTTTAAGGC GTCATTTGCG TACAGTACAG TATCCGATGA TCAATCAGTA CTTTTAGGTG CGGGTAATGG ACCTACCACG TATACTGCGC CACTGCTAAA AGGCGCTGAA GCAACTTCAG GTGCGGGAAC AGATGCCTAC AAAGTTGAAG TAGGGTATGA CTTCTCAAAA GTGGGTGTTG CAGGGCTTAA AGCCTTAGCG CAATACGTGA GAATTGATCA AGATAAAGTC ACAACGGTCG TCCTTAATGG TGTCGCTGCT GATACTGAAT CAACTTACTT TGAAGGACAA ATTTCCTATG ACCTTCCAAC CATCAAGGGT TTAACACTTT CTTTGGAGTA TGAAGATGGT AAAGTGGAAG CCGCTTCAAC TAAAAATACC AGCGATATGC GTTTTAGAGC CAATTATAAG TTCTAA
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Protein sequence | MKLVKLSVAA FVVAGLASSL FAADTLADAF KNGKVTGELR AWYFDRDTDD KNDGTLAKGD ADIFSTGLML SYVTDSLYGL SLGTTFQGNY APFANSDAKN LYATDMYGSG AVLSEAYMTY TLGKTTAKVG RQFIASPLVN SSGSRMIKEA FQAAVLINTD IPNTTLVAGY SDKFQGRTSD YDRSVDGSDS QMPSFKKEAV FYGAGTSRGS LGSPAGASNV FGFDGAYTAA VINKSITNVT LTGQYLFVND VEGTNGGDAN VFYAEGNYAL PLSSMKLLLD ATYRGSRTSN ATFDSFHAEG DMYQGRVGFS ELAGFKASFA YSTVSDDQSV LLGAGNGPTT YTAPLLKGAE ATSGAGTDAY KVEVGYDFSK VGVAGLKALA QYVRIDQDKV TTVVLNGVAA DTESTYFEGQ ISYDLPTIKG LTLSLEYEDG KVEAASTKNT SDMRFRANYK F
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