| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sdel_0529 |
|---|
| Symbol | |
|---|
| ID | 8592059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurospirillum deleyianum DSM 6946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013512 |
|---|
| Strand | + |
|---|
| Start bp | 510973 |
|---|
| End bp | 515397 |
|---|
| Gene Length | 4425 bp |
|---|
| Protein Length | 1474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | |
|---|
| Product | Glutamate synthase (ferredoxin) |
|---|
| Protein accession | YP_003303601 |
|---|
| Protein GI | 268679170 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.41827 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTTA TTACAGGATT TAAAGACAAT TGCGGTTTTG GACTAATCGC AAACATAAAA
AATATCCCAA CCCATGAAAA TGTTGAAGAT GCAATTACGG CGTTAGAGCG TATGATGCAC
AGAGGTGCGA TAGCCGCAGA TGGTAAGAGT GGCGATGGAA GTGGTCTTCT TTTTTCAATG
CCCACTGAGT TTATGAAAAA CGAAGCAAAA AAATTGGGTG TGGACTTGCC AAAGCAGTTT
GCGGTCGCAA TGATTTTTTT GCAAAATGAT GAACAAAAAC AGATTTTTGA AGAGACCTGT
GAGCAAAATG ACTTGAAAGT CCTCTTGTAC CGTGATGTAC CCGTCAAAAC AAAAGCGCTT
GGAAAATTAG CGCTGGATTC ATTACCCCAA ATTGTACAAG CCTTTGTAAC CTCTTCTTCA
TTGGTTGCGA CAAAACGCTT TGAAGCATTA TTGTATTTAA CCCGTAAAAT GGTTGAAAAA
AAGTTAGCAC AGGCTTTTGA TTTTTATATT GCTTCTTTTT CAAGTAAAGT GATTTCGTAT
AAAGGGTTGG TGATGCCAAC CTACATTAAA ACCTTTTTTC CCGATTTGAG CGATAAAGCG
TTTAAAGCAA CCTTTGCACT TTTTCATCAA CGTTTTTCGA CCAATACCCT TCCCAAATGG
AAACTCGCAC AACCGTTTCG CACTTTAGCG CATAACGGTG AGATTAACTC TATTTCAGCG
AATCGTTTTT ACACACAAGT GCGTAGCGAG TCTATAAAAA GTTCTGTTTT TACGCAAGAA
GAGCTTCAAC AACTCTATCC TTTAACCAAC GCAGATGTCA GCGATAGCGC AAGTTTAGAT
AATATGTTTG AATTTATGTT GATTAATGGG TTTGATTTTT TCAAAGCCAT TCGCTCTTTA
ATTCCTGTAC CATGGCAAAA TGCTCCTCAT ATGGATGCAG AGCTTCGAGC ATTTTATGAA
TACTCCAGTA TCAATTTTGA GCCATGGGAT GGTCCTGCTG CGATTTCTCT GACCGATGGA
CGTTACATTG CCTGTGTATT GGATAGAAAT GGTTTGCGTC CTGCCAAATA TATCATTACC
AAAGATGACC GCATTCTGAT TTCAAGTGAA TACGGTGTTT TAGATATTGA AGAGGATAAC
ATCATTGAGC GTGGTCGTTT ACAAAGTGGT CAAATGATAG GCTTAGACCT TAAATTTGGC
AAAATCATGA AAGATGATGA CATCAATGAC TACATTAAAA GCTCCAACAC TTACACAGAA
TGGCTTAATA AAGGGCTTGT TTACCTGCAA GAGTTTGTAG ATATCCCGTT TTCAAAAACA
ACGGATTATG TACGTGAAAA TTTAGAGATA GAACAGCGCT ATTTTAACAT CACGCAAGAA
GTCAAAAATA TGGTGCTTGA GCCGATGATG AAAGATGGCA AAGAGGGTGT TGGCTCTATG
GGGGATGATA CCCCAATGGC GGCATTTAGC CAAACACAGC GTAATTTTAG TGATTATTTT
AAACAAAAAT TTGCACAAGT CACCAATCCT CCGATTGACC CGATTCGTGA AAAAGTCGTT
ATGAGTTTAA ATACCAACTT TGGCATCATT CGCAATATCC TAGAAGAGGG TGAAGAACAC
GCCCTTTGTA TTAAAACCAT TTCACCTCTT TTAATGCAAG AAAAATATGA AATTATTGAT
TCGTTTGGTG ATGCCAGTAA ACCTCGTTAT AAAGAAGAGT ATAAAAATCG CTATTTCTCA
ACCCTTTTTG AAGACAACCT TAAAGGTAGT CTTGAAGATT TGGTGTATGA CATCGTTCAA
GCCGTCAAAG AAGAGGGTGT TCGCATCGTT TTCCTTGATG ATAGAGGAAT GAGTGAAAAA
CAAAAACCGA TGCCGATGAC TATGGTCATT GGTCGAGTGA ATCAGGTTTT ATTGGATGAG
GGTGTGCGCT CGCTGGTCTC CATTGTTGCC ATTAGCGGTG AAGCGTTGGA TGCCCATTCG
TGTGCCACTA TGGTTGGGTT TGGCGCCAGT GCGATTTATC CCTATCTTTT ATACGCAACC
GTTTTGGATG AGTGCAAAAA GAGTGAGATG AGTGCATATG AGACGAAAAC AAAACTTAAA
AACGTCAGTC ACGCTATCAA TCAAGGCTTG CTCAAAATTA TGTCGAAGAT GGGTATTGCA
ACGATTGCTT CATATCGAAA CTCAGCCTTA TTTGATGTCT TAGGACTTTC TAGCGAGATT
GTTAAAGAGT GTTTTAATGG TGCGATTTCA ATGATTCCAG GGCTTGGATA TAGCGATATT
GAAGAGCGTC TTTCAAACAA CCATGCAAAA GCGTATGATC TAAACATTAA CAAAAAACTC
TTTCCGCTTG AAATTGGTGG ATTTTACAAA TACATTGAGG GGCAAGAGTT TCACGACTAT
CATCCGCATA TTGTCCATGC GATTCACAAA GCCGTTGTGA CAGCGGAGAA AAAAGATTTT
GCGGAATTTA CCAAAATGGT GAATAACCGT GGCTTTAAAA TGATTCGTGA CTTTTTTGAA
CTCAAATCTG ATCGTGAGCC TATCGCATTG GAGAAAGTAG AGAGTAAAGA GGCTATTTTT
AAGCGTTTTG CTACAGCAGC GATGAGTTTA GGCTCTATCT CTCCCGAGGC GCATGAAGCG
CTAGGTGAGG CGATGAATAA AATTGGGGGT ATGAGTAACT CAGGCGAGGG TGGTGAAGCA
CCAGAGCGTC TTAAAACCCA TAAAAACTCT AAAATTAAAC AGATTGCATC GGGTCGTTTC
GGCGTAACAC CTGAGTATTT ACGCTCCGCC ACAGAGATTC AAATTAAAGT GGCACAAGGT
GCAAAACCAG GTGAGGGTGG TCAGCTTCCA GGGCATAAGG TGACACCACT CATTGCCACT
CTTCGTTATA CCATTCCAGG TGTTACACTG ATTTCTCCTC CGCCACACCA CGATATTTAC
TCGATTGAGG ATTTGGCGCA ACTTATTTTT GATATGAAGC AGATTAATCC TGATGCGATT
ATTACGGTGA AATTAGTCTC CACAGCAGGT GTTGGAACGA TTGCAGCGGG TGTTGCTAAA
GCGTATGCGG ATAAAATTAT TATCTCAGGA GGCGATGGTG GTACGGGTGC AGCACCTTTA
ACCTCCATTA AATTTGCGGG AAATCCGTGG GAATTAGGGC TGAGTGAAGC GCATAATGCA
CTCAAAGCAA ACCATTTACG TGATAGTGTT CATTTGCAAA CCGATGGTGG TTTAAAAACG
GGACTTGATG TTATTAAGGC TGCTTTATTG GGGGCAGAGA GTTATGCGTT TGGAACGCTC
TCTTTGACGA TTATTGGGTG TAAAGTGCTT CGTGTGTGTC ACCTAAACCG CTGTTCTGTG
GGTGTGGCAA CGCAAGATGA GAAGCTTCGT GAACACTTTG TCGGTACGGT CGATAAATTG
GTGAACTTCT TTACCCTATT GGCTGAAGAT GTGCGTGAGA TATTGGCACA CTTAGGCTAT
GAGCGTTTGG AAGATATTAT TGGACGAAGC GATCTTTTAC ATGTAATTGA AGATAGCTTT
GCGAAAAAGT TTGACTTCTC TTCGGTTCTG ATGCGACTCG AAGGACCCAA CACGCACAAT
GGCAAAGCCA ATGAGCCGTT TGATAAAAAT GAATTTGAGA AAGAGATTTT AAAAGAGGTT
TACAAAGTTA TTGAAAATCC TGATGAAAAA ATGGTGTTGC ACAAATCCAT TTGCAATACC
AATCGAAGCT TTGGCACACT CATCAGCGGT GAAATTGCGA AATACTATGG CAATAAAGGG
CTAAAAGATG AGAGCATTGT CTTTAGACTC AATGGCGTAG CAGGACAATC TTTGGGGGCT
TTTTTAGCCA ATGGTATTAG CATTAATCTC AAAGGCACTG CCAATGATTA TGTGGGCAAA
GGCATGAACG GTGGAAAAAT CGTTATTGCT CCAAAGTATC AAGGCAGAGG TTACTCGTGT
GCGGGCAATA CCTGTTTGTA TGGCGCAACG GGTGGAAAAC TCTTTGTTGC GGGCAATGTG
GGTGAGCGTT TTTGTGTGCG TAACTCAGGC GCTACGGCGG TTGTTGAAGG GACGGGTGAT
CATGCGTGTG AGTATATGAC AGGCGGTGTG GTTGCTATCT TAGGCAGTAC GGGTGTAAAT
TTTGGTGCGG GTATGACAGG CGGTGTGGCG TTTATCTACG ATGAAAACCG TGATTTTATT
GACAAACTCA ATCAAGAGTT GGTTGTGGCA GAGCGTATTG ATACGGATGA CATGGATGAA
GCACGCCACT TCTTAAAACG CCTCCTTCGA ACGCATATCA ATGAGACGGT GAGTTTCAAA
GCTACCCATA TTTTAGAGAA TTTCCGTGAT GTTTTAAGAG ATTTTTGGAT GGTACGCCCT
AAAGATATGA CCAATGTACC ACTCAACCCA GCGCAAGGAG ACTAA
|
|---|
| Protein sequence | MDLITGFKDN CGFGLIANIK NIPTHENVED AITALERMMH RGAIAADGKS GDGSGLLFSM
PTEFMKNEAK KLGVDLPKQF AVAMIFLQND EQKQIFEETC EQNDLKVLLY RDVPVKTKAL
GKLALDSLPQ IVQAFVTSSS LVATKRFEAL LYLTRKMVEK KLAQAFDFYI ASFSSKVISY
KGLVMPTYIK TFFPDLSDKA FKATFALFHQ RFSTNTLPKW KLAQPFRTLA HNGEINSISA
NRFYTQVRSE SIKSSVFTQE ELQQLYPLTN ADVSDSASLD NMFEFMLING FDFFKAIRSL
IPVPWQNAPH MDAELRAFYE YSSINFEPWD GPAAISLTDG RYIACVLDRN GLRPAKYIIT
KDDRILISSE YGVLDIEEDN IIERGRLQSG QMIGLDLKFG KIMKDDDIND YIKSSNTYTE
WLNKGLVYLQ EFVDIPFSKT TDYVRENLEI EQRYFNITQE VKNMVLEPMM KDGKEGVGSM
GDDTPMAAFS QTQRNFSDYF KQKFAQVTNP PIDPIREKVV MSLNTNFGII RNILEEGEEH
ALCIKTISPL LMQEKYEIID SFGDASKPRY KEEYKNRYFS TLFEDNLKGS LEDLVYDIVQ
AVKEEGVRIV FLDDRGMSEK QKPMPMTMVI GRVNQVLLDE GVRSLVSIVA ISGEALDAHS
CATMVGFGAS AIYPYLLYAT VLDECKKSEM SAYETKTKLK NVSHAINQGL LKIMSKMGIA
TIASYRNSAL FDVLGLSSEI VKECFNGAIS MIPGLGYSDI EERLSNNHAK AYDLNINKKL
FPLEIGGFYK YIEGQEFHDY HPHIVHAIHK AVVTAEKKDF AEFTKMVNNR GFKMIRDFFE
LKSDREPIAL EKVESKEAIF KRFATAAMSL GSISPEAHEA LGEAMNKIGG MSNSGEGGEA
PERLKTHKNS KIKQIASGRF GVTPEYLRSA TEIQIKVAQG AKPGEGGQLP GHKVTPLIAT
LRYTIPGVTL ISPPPHHDIY SIEDLAQLIF DMKQINPDAI ITVKLVSTAG VGTIAAGVAK
AYADKIIISG GDGGTGAAPL TSIKFAGNPW ELGLSEAHNA LKANHLRDSV HLQTDGGLKT
GLDVIKAALL GAESYAFGTL SLTIIGCKVL RVCHLNRCSV GVATQDEKLR EHFVGTVDKL
VNFFTLLAED VREILAHLGY ERLEDIIGRS DLLHVIEDSF AKKFDFSSVL MRLEGPNTHN
GKANEPFDKN EFEKEILKEV YKVIENPDEK MVLHKSICNT NRSFGTLISG EIAKYYGNKG
LKDESIVFRL NGVAGQSLGA FLANGISINL KGTANDYVGK GMNGGKIVIA PKYQGRGYSC
AGNTCLYGAT GGKLFVAGNV GERFCVRNSG ATAVVEGTGD HACEYMTGGV VAILGSTGVN
FGAGMTGGVA FIYDENRDFI DKLNQELVVA ERIDTDDMDE ARHFLKRLLR THINETVSFK
ATHILENFRD VLRDFWMVRP KDMTNVPLNP AQGD
|
|---|
| |