Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sdel_0025 |
Symbol | |
ID | 8591536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurospirillum deleyianum DSM 6946 |
Kingdom | Bacteria |
Replicon accession | NC_013512 |
Strand | + |
Start bp | 24823 |
End bp | 26124 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | |
Product | MATE efflux family protein |
Protein accession | YP_003303098 |
Protein GI | 268678667 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00700816 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGGTTATA AAGAGTATTT AAGTATCGCC ATTCCCTTTG TCATTTCGAC TGTGACACAG CCTCTTTTGG GTGCGGTGGA TACGGCGGTG ATTGGGCGTT TGGGTGAGCC TGCTTTTGTG GGTGGTGTTG CCATTGGTAC AGCCATTTTG AACACGCTTT ATTGGTTGTT TGGTTTTTTG CGTGTGGGAA CATCGGGATT TTCCGCACAA GCGCTGGGCT CTCAAAGTGA AAAGCAGATC TATTTTGCTT ATTTTAGGCC TCTTTTTATT GCGCTGTGCA TTAGCGTGAT TTTTATTGGT TTGCATCAGC CTATTTTAGA GGGGGCGTTT GCCATTTATG AGCCTGAAAG TAGAGTTTTG GAGAGTACAC AGACCTACTT TGAGATTTTG ATTTGGGGTG CTCCTTTTGT TTTGATTGGG TATGTGAATT TGGGTTGGAT TATGGGGCAA AAGCGCATTA AAGAGACGAT GTGGCTTCAG ATTTCAACCA ATCTTATTAA CATTATCCTC GATGTGGTGT TTGTCTTTTA TTGTGATTTT GGCGTAGCGG GTGTGGCGTA TGCAACCTTG ATTGCTCAAG GGTATGCGTT TGTTTTAGGG CTTTGGTTTA TCTCAAAAAT CATCACCTTT AAGCGTATTG TTCATTTTAA AGAGGAGCTT CTGCACAAAG GTGAGCTTAA AAAAATTATG AGTGTCAATG GCGACTTGAT GATTCGCACC GTCTGTTTGC TAGCCATGAC CAATATGTTT GTCGCACGAG GCAACCGTTT TGGAGTGGAA ATTTTGGCGG CAAATGCTAT TTTGTTTCAG ATTCAGTATA TTATCTCTTA TCTGTTCGAT GGACTTGCCA ATGCCTCAAG CATCTTTGCG GGGCGTGCCG TGGGGGCTAA AAACAAAGAG CAGTACCATG AAGTATTTCG GATTTCTAAT GTGATGGTTT TTGGATTAAG TATGCTAGTG GCTTTGATGA TAGTTCTTTT TGAGAAGCCT ATGATTGCGC TTTTTACAGA TATCGCTTCG GTGCAAACAC TTTGTTTGGA GTACACCCTT TGGCTGGCGA TTTTTCCTTT TTGTGTGGGA ATTGGACTGG TCTATTATGG TGTTTTTACG GGTGCCACCT ACACGAAGCC CGTGCGTGAT TCGATGGTCT TTTCTCTCTT TATCTTTGTT GTTGCCTATT TTAGTTTTAT CCCCTACTTT GATAATCACG GCTTATGGTT GGCGTTTATT CTCTTTAGTG CTGGGCGTAG TTTCTTTCTT TTTAGAGAGA CGAAAAAGCT GGAGCGTCAC TCCTTCTCGT AA
|
Protein sequence | MGYKEYLSIA IPFVISTVTQ PLLGAVDTAV IGRLGEPAFV GGVAIGTAIL NTLYWLFGFL RVGTSGFSAQ ALGSQSEKQI YFAYFRPLFI ALCISVIFIG LHQPILEGAF AIYEPESRVL ESTQTYFEIL IWGAPFVLIG YVNLGWIMGQ KRIKETMWLQ ISTNLINIIL DVVFVFYCDF GVAGVAYATL IAQGYAFVLG LWFISKIITF KRIVHFKEEL LHKGELKKIM SVNGDLMIRT VCLLAMTNMF VARGNRFGVE ILAANAILFQ IQYIISYLFD GLANASSIFA GRAVGAKNKE QYHEVFRISN VMVFGLSMLV ALMIVLFEKP MIALFTDIAS VQTLCLEYTL WLAIFPFCVG IGLVYYGVFT GATYTKPVRD SMVFSLFIFV VAYFSFIPYF DNHGLWLAFI LFSAGRSFFL FRETKKLERH SFS
|
| |