| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcur_3555 |
|---|
| Symbol | |
|---|
| ID | 8604906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermomonospora curvata DSM 43183 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013510 |
|---|
| Strand | - |
|---|
| Start bp | 4081417 |
|---|
| End bp | 4084248 |
|---|
| Gene Length | 2832 bp |
|---|
| Protein Length | 943 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
|---|
| Protein accession | YP_003301128 |
|---|
| Protein GI | 269127758 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0503799 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCG AAAGCGCCAG GCGGTTTCCG CCTCGTGTGG TGCCGATCGG TGTCGTCGCG
CTGGCAGCAG TGCTCTTCGT CCTGGTCTCG CTGCTGGGCG GCGGCGAGGT GGGCATGCCC
GCCTGGGCGG AGACTGTGGC CGCGATGGCG GCGGTGGTGT CGCTGCTGGC CGCGGTGTTC
CCGTTGCCCG TCCGGCGGCG GCAGGAGGCG GGCGAGGGCG GCGCGGCCGG CGGCGCGGGC
CCGCCGCCGG TCCGCCGTGA CCTGCGCCGG GACAGCTGGG GCTGGTTCGC CGTGGCCGCC
GCCTGCTGGC TGGCCGGGTC GGTGGCCGGT GCGGTCTCCC CGGGCCTGCT GGACACCAGC
AGCGGGGCGC TGTCGCTGGC CGACCTGTTC TACCTGGCCG CCATCGCCGC GCTGACCACC
GGTTTCATCG TCCCGGTCCA GCTGCCGCGG GACGTGGGCA CCTGGGTGCG CTACATCGCC
GACACCTACG TGTGCGTGGC GGCGCTGTTC GTGTTCGGCT GGGTCGCGGA GTTCGGCACG
CTCTACCACC TGTCGGGGGA GAGCCCCGCC GAGTTCGTCC TGGAGCTGCT CTACCCGCTG
GTGGGCATCG TCCTGCTGTG GGGGGCGCTG CCGTTCGTGC TGGGCGCGGC CCGCCCCTAC
CGGCCCGGCG TGTGGACCGC CTACCTGGCG CTGACCGCGT TCGTGATCGC CGATGTGGTC
TCCATGGCCG TCCGGCTGCG CGGGGACGCC GCCCCGGTCG GCGACATCGG GGACGCGGCG
CGCGTGGCGG GACTGCTGGC CCTCGGCCTG GCCCCCTGGA TCACCCCTCC GCCGCGCGGC
GACGAGCCGG CCGCCGAGGA CGCCGAGTTC GAGGGGGGCC TGCCGCGGGG CCGGATGATC
GGTCCCGGGA TCGCCCCGGC GGCGGTCGGC GCGGCCGCCG CGATCTTCGT CGCCGGTCAC
TCGCTGACCG GCTCGCGGGG GATGGAGCCG GTGGTGTCCC TGATCGCCGG CTCGGCGGTG
CTGGTGATGC TGGCCCGCCT GGCCGGGCTG CAGCGGGAGA ACGACGGGCT GCGGCGCGCG
GTCGGCGCCG GCGAGGAGCA CTTCCGGGCG CTCGCCGAGA GCATCAACGA CCTGGTGCTG
ATCTGCGACT TGAACGGGGT GGTGCAGTAC GTCTCCGACA AGGCGCACCG CACCTACGAG
CACGTTCCCG ACGACCTGCT CGGCCGCTCG GTGACCGAGT TCATCCACCC CGAGGACCTG
CCGCACGTGG AGGAGGTCTA CGGCGAGTTC CTGACCACCG ACCGGCCCGC GCTGCGGATC
TCCTGCCGGG TGCGCGCCGC CGACGGCACC TGGCTGCCCA CGGAGTCCAC CGTCTCCCGC
TACACCTCCT CCCGGGTGCT GATCACCACC CGGGACCTGT CGGAGCAGGC CGCACTGCAG
CGCCAGGTCA CCCACCTGAC CTTCCACGAC GGGCTGACCG GGCTGCCCAA CCGGGCCTAC
TTCGAAGAGC GGGTGCACGA GGTGGTCGGC CGCGAGCCCA GCCCGGAGAC GGTGGCGGTG
CTGTTTGTGG ACCTGGACGG TTTCACCGCG GTCAACGACT CGGCCGGGCA CGCCGCCGGC
GACCAGGTGC TGGCCCAGGC CGCCCGCCGG CTGCGCAGCG CCGTTCAGGC CGACGACACC
GTGGCCCGCT GGGGGGGCGA TGAGTTCGCG GTGCTGGTGG AGAACTCCGA CGAGGCGCGT
TCCATCGTGG AGCTGGCCGA ACGGCTGCTG CGGGTGCTGA CCGCCGAGCC GTATCGGGCC
GGTGAGCGCG AGGTCGTGCT GAGCGCCAGC ATCGGCATCG CCTTCGCCGA TGACCCGCCC
TCCGGCGACA GCGAACGGCG CAGCGGCGCC GAGCTGATCC GCAACGGCGA TCTGGCGATG
GCGCGGGCCA AGGAGCTGGG CGGCGGGCGC GTGGAGGTGT ACGCCGCGCA CATGCACACC
GATGTGGTGC GGCGGCTGGA GTTGGGCGCC GACCTGCAGC GGGCGCTGGC CGAAGAGCAG
TTCGCGGTGG AGTTCCAGCC GGTGGTCGAG CTGGACACCT CCCGGGTGAC CGGGGTGGAG
GCGCTGGTGC GGTGGTGGCG CGGCAGCGAG TCGGTGCCGC CGCAGGACTT CATCCGCCCC
GCCGAGGAGT CCGGGCTGAT GATCACGCTG GGCGACTGGG TGCTGCGCCA GGCCTGCCGC
CAGGTGGCCC GCTGGCGCGC CGAGTCCTGG CAGGTGGACC TGTCGGTCAA CTTCACCGCC
CGGCAGATCG CCGCCCCCCG CTTCGTGGAG TCGGTGGCGC AGGTGCTGGA GGAGACCGGC
CTGCCGCCCC AGGCCCTCAC CGTGGAGGTC ACCGAGGCGG TCCTGGTCGA GGACGCCGGG
CAGACCGTCG AGCGGCTGTC GGCGCTGCGC GAGCTGGGGG TGCGGCTGGC CATCGACGAC
TTCGGCACCG GGTACGCCTC CCTGGCCCAC CTGGGCCGGC TCCCGGTGGA CGTGATCAAG
ATCGACCCGT CGTTCGTGGC CGGGCTGGGC CGCGATGAGA CCCGGACCCT GCTGACCCGC
GCCATCGTGC GGCTCGGCCA CGACCTGGGG CTGACCGTGG TGGCCGAGGG CATCGAGCGG
CCCGAGCAGC TGGAGCTGCT GCGCCAGATG AACTGCCCGC GCGGCCAGGG GTTCCTGGTG
GCCCGCCCGA TGGCGCCCGG CCCCGCCGAG TCGCTGCTGC GCACCAACCT CACCACCGTC
CAGGACACCG TGCCGGACGA TTCGGGGGAG CCGGGCGTCC GGCTGCCCGG ATCGGCCCTG
TCACCGGGCT GA
|
|---|
| Protein sequence | MSGESARRFP PRVVPIGVVA LAAVLFVLVS LLGGGEVGMP AWAETVAAMA AVVSLLAAVF
PLPVRRRQEA GEGGAAGGAG PPPVRRDLRR DSWGWFAVAA ACWLAGSVAG AVSPGLLDTS
SGALSLADLF YLAAIAALTT GFIVPVQLPR DVGTWVRYIA DTYVCVAALF VFGWVAEFGT
LYHLSGESPA EFVLELLYPL VGIVLLWGAL PFVLGAARPY RPGVWTAYLA LTAFVIADVV
SMAVRLRGDA APVGDIGDAA RVAGLLALGL APWITPPPRG DEPAAEDAEF EGGLPRGRMI
GPGIAPAAVG AAAAIFVAGH SLTGSRGMEP VVSLIAGSAV LVMLARLAGL QRENDGLRRA
VGAGEEHFRA LAESINDLVL ICDLNGVVQY VSDKAHRTYE HVPDDLLGRS VTEFIHPEDL
PHVEEVYGEF LTTDRPALRI SCRVRAADGT WLPTESTVSR YTSSRVLITT RDLSEQAALQ
RQVTHLTFHD GLTGLPNRAY FEERVHEVVG REPSPETVAV LFVDLDGFTA VNDSAGHAAG
DQVLAQAARR LRSAVQADDT VARWGGDEFA VLVENSDEAR SIVELAERLL RVLTAEPYRA
GEREVVLSAS IGIAFADDPP SGDSERRSGA ELIRNGDLAM ARAKELGGGR VEVYAAHMHT
DVVRRLELGA DLQRALAEEQ FAVEFQPVVE LDTSRVTGVE ALVRWWRGSE SVPPQDFIRP
AEESGLMITL GDWVLRQACR QVARWRAESW QVDLSVNFTA RQIAAPRFVE SVAQVLEETG
LPPQALTVEV TEAVLVEDAG QTVERLSALR ELGVRLAIDD FGTGYASLAH LGRLPVDVIK
IDPSFVAGLG RDETRTLLTR AIVRLGHDLG LTVVAEGIER PEQLELLRQM NCPRGQGFLV
ARPMAPGPAE SLLRTNLTTV QDTVPDDSGE PGVRLPGSAL SPG
|
|---|
| |