Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcur_3221 |
Symbol | |
ID | 8604567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermomonospora curvata DSM 43183 |
Kingdom | Bacteria |
Replicon accession | NC_013510 |
Strand | - |
Start bp | 3723658 |
End bp | 3725943 |
Gene Length | 2286 bp |
Protein Length | 761 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | protein-export membrane protein SecD |
Protein accession | YP_003300798 |
Protein GI | 269127428 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.390214 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGTCCCGCC CCTTGATGTG GCGGGCGCTG CTGGCGCTCG CCATCATCGC CGGATCGATA TTCGTCGCGC TGACCCAGCC CGCCAAACTC GGCCTCGACC TGCGCGGCGG CACCCAGATC GTGCTGGAGA CCAAAGACGG CCCCAACGTC AAGGCCAACC GGGAGTCCAC CGACCGGGCC CTGGAGGTGC TGCGCAAGCG GGTCGACGCG CTCGGCGTGG CCGAGTCCTC CATCACCCGC TCCGGTGAGC GGCGCATCAT CGTCGAGCTG CCGGATGTGC AGGACCCCAA GCGGGCCGCC GAGGCGGTCG GCCGCACCGC CCAGCTCACC GCGCACCCGG TGCGCGCCAA CGACGGCAAG CCCGACAAAA AGAACGGCGA GCAGATCCTG CCCGATGAGG ACGGCCGGCC GATCCTGCTG AAGAAGGCCG CGCTGAGCGG CGCCCAGATC CGCTCCGCCA GCGCCTCCTT CGACCAGCAG AACATGCAGG GCTGGTACAT CACCGTCGAC TTCCGCGGCG ACGGCGGCCG CATCTGGCAG AAGATCACCG CCGAGGCCGC CTGCAAGAGC GACCCCGACG ACCGGCGGAT CGCCTTCGTC CTGGACGGAA AGGTGATCTC CTCGCCGGTG GTGCAGGAGG ACGTGCCCTG CAACGTCGGC ATCACCGGCG GCTCCACCCA GATCACCGGA CAGTTCAGCG CCCGGGAGGC CAAGGAGCTG GCCGCGCTGA TCCAGGGCGG CTCGCTGCCG GTCCCGGTGG AGATCATCGA ACAGCGGGTG GTCGGCCCCA CCCTGGGCGA GGAGGCCATC CAGGCCAGCT GGCAGGCCGC CGTCATCGGC ATCGTGCTCA CCGGCCTGTT CATCATCTGG ATCTACCGCC TGGTCGGCTT CCTGGCCACG CTCGCGCTGG CCGCCTACGG GGTGATCTCT TACGCCGCGC TGGTGGCGAT GGGCGCCACG CTGACCCTGC CCGGCCTGGC CGGTTTCGTG CTCGCCATCG GCATGGCGGT GGACGCCAAC GTGCTGGTGT TCGAACGGGC CCGCGAAGAG TATGCGGCGG TGCCGCGCCG GGGCATGCGC CCGGCGCTGG TCATCGGCTT CCAGAAGGCC TGGTCGGCCA TCGCCGACTC CAACATCACC ACCGTGCTGG CGGCCGGCCT GCTGTTCTTC CTGGCCGCCG GGCCGGTGCG CGGCTTCGGC GTCACGCTGA CCATCGGTGT GCTGGCCTCG CTGGTCTCCG CCCTGCTGGT CACGCGCGTG CTGGCCGAGT GGGCGGTGAG CCGGCGGCCG ATCGCCAAGC GGCCCGCCCT GACCGGGCTG AGCAAGACCG GGCGGGTCCG CGACTGGCTG GACCGCAAGC AGCCCGACCT GATGCGGCGC AAGACCCTGT GGCTGACCGT CTCCGGGCTC CTGGTCGCCG GCTCGATCGC CGGGATCGTC ATCCAGGGCC TGAACTTCGG CGTGGAGTTC ACCGGGGGCC GCCAGGTCGT CTACAGCACC AGCCAGCGGA TGGACATCAA CGACGCCCGG GCCGCGGTGG CCGACGCCGG GTTCCCCCGC GCGGTGGTGC AGACCGCCGG CACCGACGGG GAGGACATCT CCATCCGCAC CGAAAAACTC ACCAACGCCG AGGTCGACAA GCTGCAGCAG GCGCTGGAGA AGGCCGGCGG CGGCACCGTC ACCAAGGAGC GCGACGAGCT GATCGGCCCC AGCCTGGGCA GCGAGCTGCG CAAGAAGGCG CTGATCGCCT TGGGCGTGGC GCTGGCCGCC CAGCTGATCT ACCTGGCGGT CCGCTTCCGC TTCACCTTCG GCGCCGCCGC GGTGCTGGCG ATGTTCCACG ACGTGATCGT CGTCACCGGC GTGTTCGCCT GGCTGGGCAA GCCCATCGAC GGGGTGTTCC TGGCCGCGCT GCTGACCATC ATCGGTTACT CGGTCAACGA CTCGGTGGTG GTCTTCGACC GGATCCGCGA GCTGTGGCGG GCCGCGCCCG AAGAGCGCTT CGCCAAGATC GCCAACCGGG GCGCCCTGCA GACGGTGCCG CGCACCGTCA ACACCGGTAT GGGCGCGATC TTCATCCTGG CCGCGCTGGC GCTGCTCGGC GGCGACTCGC TGACCGACTT CGCCATCGCG CTGCTGCTGG GCATCGTGGT GGGCACCTAC TCCACCGTGT TCACCGCCAC CCCGCTGGCG ATCGTCTTCC AGGCCCGCAG CAAGACCCCG GCGCCCAAGC CCAAGCTCGC CAAGCGCCCG GTGCGCCAGC CCGGCGACTC CGGCGCGGTC GTGTGA
|
Protein sequence | MSRPLMWRAL LALAIIAGSI FVALTQPAKL GLDLRGGTQI VLETKDGPNV KANRESTDRA LEVLRKRVDA LGVAESSITR SGERRIIVEL PDVQDPKRAA EAVGRTAQLT AHPVRANDGK PDKKNGEQIL PDEDGRPILL KKAALSGAQI RSASASFDQQ NMQGWYITVD FRGDGGRIWQ KITAEAACKS DPDDRRIAFV LDGKVISSPV VQEDVPCNVG ITGGSTQITG QFSAREAKEL AALIQGGSLP VPVEIIEQRV VGPTLGEEAI QASWQAAVIG IVLTGLFIIW IYRLVGFLAT LALAAYGVIS YAALVAMGAT LTLPGLAGFV LAIGMAVDAN VLVFERAREE YAAVPRRGMR PALVIGFQKA WSAIADSNIT TVLAAGLLFF LAAGPVRGFG VTLTIGVLAS LVSALLVTRV LAEWAVSRRP IAKRPALTGL SKTGRVRDWL DRKQPDLMRR KTLWLTVSGL LVAGSIAGIV IQGLNFGVEF TGGRQVVYST SQRMDINDAR AAVADAGFPR AVVQTAGTDG EDISIRTEKL TNAEVDKLQQ ALEKAGGGTV TKERDELIGP SLGSELRKKA LIALGVALAA QLIYLAVRFR FTFGAAAVLA MFHDVIVVTG VFAWLGKPID GVFLAALLTI IGYSVNDSVV VFDRIRELWR AAPEERFAKI ANRGALQTVP RTVNTGMGAI FILAALALLG GDSLTDFAIA LLLGIVVGTY STVFTATPLA IVFQARSKTP APKPKLAKRP VRQPGDSGAV V
|
| |