Gene Tcur_2679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcur_2679 
Symbol 
ID8604022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermomonospora curvata DSM 43183 
KingdomBacteria 
Replicon accessionNC_013510 
Strand
Start bp3128254 
End bp3131151 
Gene Length2898 bp 
Protein Length965 aa 
Translation table11 
GC content68% 
IMG OID 
ProductCRISPR-associated helicase Cas3 
Protein accessionYP_003300269 
Protein GI269126899 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000878559 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGAAG GGGAGGAGCC TGGCCGGCTG GGAGAGGGCC TGTCGGCTGT CGCCCGGGCC 
GTGTGGGCCA AGCATGACCG CGCGGCTGAA GGATGGCTGC CGCTGTGGCG GCACATGGCT
GACAGCGGCG CGGTAGCGGG ACTGCTGTGG GATGAGTGGA TTCCTCACCA AGTACGGCGA
CTGATCTCCG CGGAGTTGCC GGGAGGTGCC GAGGACGCTC GGCGGCTGGT GGTGTGGCTG
GCGACTACGC ATGACATCGG GAAGGCCACG CCGGCGTTCG CGTGTCAGGT GGAGGCACTC
GCTGCCGCGA TGCGAGATGC CGGGTTGGGC ATGCCCGGCC ACCGGGAGAT GATCGATCGG
GGGCTTGCCC CGCATGGGCT GGCGGGGCAG TTCCTGCTAC AGGAATGGCT GATAGAGCGG
CACGGGTGGA ACCGATCCGC GGCGCTGCAG CTCGCGGTCA TTGCCGGTGG GCATCATGGT
GTTCCGCCGG CCTACCAGAA CGTTCATGAT CTGAATGCCC GCCGCTACCT GCTTCGCACG
CCCGATCGCG AGTCGGCGTG GCGGAGCGTG CAGGAGGAGC TGCTGGACGC TTGTGCGGCG
GCTTGCGGCG TCCGTGATCG GCTGGACGAC TGGCGGCGGG TGAAGCTGTC ACAGCCGGCA
CAGGTGCTGC TGACGGGATT GGTGATCGTC GCTGACTGGA TCGCCAGCAA CCCCGATCTT
TTTCCCTACT TCCCTGAGGC CGCGCACATA AGTGACCGCG AGCGCATCGA GGCGGCCTGG
CGCGGTCTGG CGCTGCCGGC TCCTTGGCGG GCGGTGGAGC CGGATGAGGA CACAGATGAG
CTGTTCGCCG CACGGTTCGC GCTGCCCCTG GGAGCGCGTG TCCGGCCGGT GCAGGAGCAA
GCGGTGAAGC TGGCGCGCGG CATGGCCGCA CCGGGGCTGA TGATCATCGA GGCGCCGATG
GGGGAAGGGA AGACCGAGGC CGCGCTGGCG GTCGCCGAGA TCTTCGCGGC GCGTTCCGGG
GCGGGTGGCT GCTATGTGGC GCTGCCCACC ATGGCGACCG GCAATGCGAT GTTCCCCCGT
CTGCTGGAGT GGCTGCGGCG GCTCCCGGCC GGCGGCTCAG GCGAAACGCA CTCTGTGTAT
CTGGCGCATT CGAAGGCGGC GCTGAACGAG AAGTACGTCG AGCTCATGCG CACCGGCCGG
CGGACGGTGA GCGCGGTGGA ACTGGACGGC CCCGGTGACG AGCGGCGACA TCACGGTGAT
CGACGTGTCC ACTCCGCCGA GCTCGTCGCC CACCACTGGC TTCGCGGCAG GAAGAAGGCG
ATGCTCGCCT CCTTCGGGGT GGGGACCATC GATCAGCTGC TGTTCATGGG GCTCAAGAGC
CGGCACGTGG CGCTGCGCCA CCTTGCGCTG GCGGGCAAGG TCGTCATCAT CGACGAGGCC
CATGCCTACG ACACCTACAT GAACACCTAC CTGGACCGGG TGCTGTCCTG GCTGGGCGCC
TACCGCGTGC CGGTGATCGT GCTGTCGGCG ACGCTTCCGG CCGGGCGGAG ACGGGAACTC
CTTGAGGCTT ACGCGGGGAC GAGCGGGTCC GGCCTCACGG AGGTGGAGAG GGCTGAGGGC
TACCCGCTGC TGACCGCCGC GGCTCCTGGA CGGTCTCCGG TATTGCAGCC CGTCGCCCCG
TCCGGTCGTT GCACCGCTGT TCATATGGAA CGGCTGGAGG ACGACCTTGA CGTCCTGGCG
GACCGGCTGG AAGAGGAGTT GTCCGACGGC GGCTGCGCAC TGGTGGTGCG CAACACCGTT
GATCGCGTCC TGCAGACCGC TGCGCACTTG CGGAAGCGGT TCGGCAACGT GACCGTCGCT
CATGCGCGTT TCCTCGACTT GGATCGGATG GCCAAGGACG CCGAGCTGTT GAAGCTGTTC
GGTCCGCCCG GCAAGGACAC CAAACGCCCC AAAGAGGCTC ACATCGTGGT GGCGAGCCAG
GTGGCCGAGC AGTCCCTCGA CATCGACTTT GATCTGCTGG TGACCGATCT GTGCCCGATC
GACCTGCTGT TGCAGCGCAT GGGACGGGTG CACCGGCACC TGCGGGGCGA GGGGCAGTCG
GAGCGTCCGC CGCGGCTTCG CACCGCCCGG TGCCTGGTCA CCGGTGCGGA TTGGGCGGCC
GTTCCGGTCG AGCCGGTCAG CGGTTCCCGG CGGATTTACC GGCCTTACCC GTTGTTGCGC
GCTGCGGCCG TTCTGGAGCC TTACCTCAGC GGCAGCGCAG AAACCGGACA TATTGTGCGC
CTTCCGGAGG ACATCAGCCC GCTGGTGCAA AAGGCCTATG GACACGATCC CGCGGGGCCG
GCCGAGTGGC AGAAGGCGCT CGAAGAGGCC CGGCGCGATC AGGAGCTGCA CCAGGAAAAG
CAGCGCAAGG AGGCAGAGTC CTTCCAGCTC GGCAAGGTCG GAAAGGACGG CCGTGCCCTG
ATCGGATGGC TCGACGCCGG AGTCGGCGAC GCCGACGACA CCCGGGCGGG CAGGGCCCAG
GTCCGCGACG GCGAGGAGTC CTTGGAAGTC CTGGTGGTGC AGCGCCTGGC CGACGGGACC
GTGCGGACGG TGCCGTGGCT CACCGAAGGA CGCGGTGGCC TGGAGCTGCC CACCGAGACC
GCGCCCGAGC CGCGTTTGGC GCGGATAGTG GCGGCCTGCG GGCTGCGGCT TCCCTTCCAG
TTCTCGACCC CCGAAGTCCT TGACCGCGCG ATCGAGGAAC TGGAGGCCGA ATGCATCCCG
GCCTGGCAGT CCAAAGAGTG CCATTGGCTG GCCGGTGAAC TGATCCTCTT TCTGGACGAG
AACTGTCGGA CCCGTCTGGC AGGCTACGAC CTGCATTACA CGCCCACGGA TGGCCTGGAG
GTGACTCGTG CCGAGTGA
 
Protein sequence
MIEGEEPGRL GEGLSAVARA VWAKHDRAAE GWLPLWRHMA DSGAVAGLLW DEWIPHQVRR 
LISAELPGGA EDARRLVVWL ATTHDIGKAT PAFACQVEAL AAAMRDAGLG MPGHREMIDR
GLAPHGLAGQ FLLQEWLIER HGWNRSAALQ LAVIAGGHHG VPPAYQNVHD LNARRYLLRT
PDRESAWRSV QEELLDACAA ACGVRDRLDD WRRVKLSQPA QVLLTGLVIV ADWIASNPDL
FPYFPEAAHI SDRERIEAAW RGLALPAPWR AVEPDEDTDE LFAARFALPL GARVRPVQEQ
AVKLARGMAA PGLMIIEAPM GEGKTEAALA VAEIFAARSG AGGCYVALPT MATGNAMFPR
LLEWLRRLPA GGSGETHSVY LAHSKAALNE KYVELMRTGR RTVSAVELDG PGDERRHHGD
RRVHSAELVA HHWLRGRKKA MLASFGVGTI DQLLFMGLKS RHVALRHLAL AGKVVIIDEA
HAYDTYMNTY LDRVLSWLGA YRVPVIVLSA TLPAGRRREL LEAYAGTSGS GLTEVERAEG
YPLLTAAAPG RSPVLQPVAP SGRCTAVHME RLEDDLDVLA DRLEEELSDG GCALVVRNTV
DRVLQTAAHL RKRFGNVTVA HARFLDLDRM AKDAELLKLF GPPGKDTKRP KEAHIVVASQ
VAEQSLDIDF DLLVTDLCPI DLLLQRMGRV HRHLRGEGQS ERPPRLRTAR CLVTGADWAA
VPVEPVSGSR RIYRPYPLLR AAAVLEPYLS GSAETGHIVR LPEDISPLVQ KAYGHDPAGP
AEWQKALEEA RRDQELHQEK QRKEAESFQL GKVGKDGRAL IGWLDAGVGD ADDTRAGRAQ
VRDGEESLEV LVVQRLADGT VRTVPWLTEG RGGLELPTET APEPRLARIV AACGLRLPFQ
FSTPEVLDRA IEELEAECIP AWQSKECHWL AGELILFLDE NCRTRLAGYD LHYTPTDGLE
VTRAE