Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcur_1960 |
Symbol | |
ID | 8603287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermomonospora curvata DSM 43183 |
Kingdom | Bacteria |
Replicon accession | NC_013510 |
Strand | + |
Start bp | 2318176 |
End bp | 2319861 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | cytochrome c oxidase, subunit I |
Protein accession | YP_003299565 |
Protein GI | 269126195 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00322963 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTGA CCAGCCCGGC GCCGGCGCCC GCCGCCGCCG TCGCGCAGGA CCGAACCCGC AAGGGCTCGA TCATTGTCAG CTGGCTGACA TCCACCGATC ACAAAGTGAT CGGTTACATG TATCTGATCA CCTCCTACGT CTTCTTCCTC ATTGGCGGGT TGCTGGCGTT GGTGGTGCGC GCCGAGCTGG CCGAGCCCGG CCTGCAGTTC ATCTCCAACG AGCAGTACAA CCAGGCCTTC ACCATGCACG GCCTGGTCAT GCTGCTGCTG TTCGCCACCC CGCTGTTCGT CGGCTTCGCC AACGTGCTGG TGCCGCTGCA GATCGGCGCG CCGGACGTGG CCTTCCCCCG GCTGAACATG CTCGGGTACT ACCTGTTCCT GTTCGGCGGG CTGATCGCCG CGGCCTCGTT CCTGACCCCC GGCGGGGCGC CCAGCTTCGG CTGGTACATG TACCCGCCGC TGTCGAACGA GGTCTACAGC CCCGGCATCG GCGCCGACCT GGGCATCCTG GGGCTGACCC TGGGCGGCTT CAGCACCATC CTGGCCGCGG TCAACTTCAT CACCACGATC CTGTGCATGC GGGCGCCCGG CATGACGATG TTCCGCCTGC CCATCTTCAC CTGGAACATC CTGCTGGTCA GCATCCTGGT GCTCGCGGTG TTCCCGCCGC TGGCGGCGGT GCTGATCGCC ATGGAGGCCG ACCGCAAGCT CGGTGCCCAC ATCTTCGACC CGGAGATCGG CGGGGCGATC CTCTTCCAGC ACCTGTTCTG GTTCTTCGGG CACCCCGAGG TTTACGTGCT GGCGCTGCCG TTCTTCGGGA TCATCTCCGA GATCATCCCG GCCTTCAGCC GCAAGCCCAT CTTCGGCTAC ATCGGCATGG TCGGCGCCAC CTTGGCGATC GCCGGTCTGT CGCTGGCGGT GTGGGCGCAC CACATGTACA CCACCGGCCA GGTGCTGCTG CCGTTCTTCT CCTTCCTGAC CTTCATGATC GCCGTGCCCA CCGGCATCAA GTTCTTCAAC TGGGTCGGCA CCATGTGGCG AGGGCAGCTC ACCTTCGAGT CGCCCATGCT GTTCTCCGTC GGCTTCCTGG TGACGTTCCT GTTCGGCGGG CTCACCGGGG TGATGCTGGC CGCGCCGCCG ATGGACTTCC ACCTCAGCGA CAGCTACTTC GTGGTCGCCC ACTTCCACTA CACGCTGTTC GGCACCGTGG TGTTCGCCAT GTTCGCCGGC TTCTACTTCT GGTGGCCCAA GTGGACCGGC AAGAAGCTGT CGGAGGGCTG GGCCAAGGTC CACTTCTGGA CGCTGTTCAT CGGCTTCCAC GCCACCTTCC TGGTGCAGCA CTGGCTGGGC GTGGAGGGCT ACCCGCGCCG GTACGCCGAC TACCCCGATG AGTTCGCCGC GCTCAACATG ATCTCCACGG TCGGGGCGTT CCTGCTGAGC GTCTCCACCC TGCCGTTCCT GTGGAACGTC TGGATCACCT GGCGGAACGG CAAGAAGGTC GAGGAGGACG ACCCGTGGGG CTACTGCGGC TCCCTGGAGT GGGCCACCTC CTGCCCGCCG CCGCGGCACA ACTTCACCGC CATCCCCCGC ATCCGCTCCG AGCGGCCCGC CTTCGACCTG CACCACCCGC CACTGGCCGC CACAGGCGCC AAGGAGGTGG AGGCGTCCGC GGGGGACTCC TCCTGA
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Protein sequence | MTLTSPAPAP AAAVAQDRTR KGSIIVSWLT STDHKVIGYM YLITSYVFFL IGGLLALVVR AELAEPGLQF ISNEQYNQAF TMHGLVMLLL FATPLFVGFA NVLVPLQIGA PDVAFPRLNM LGYYLFLFGG LIAAASFLTP GGAPSFGWYM YPPLSNEVYS PGIGADLGIL GLTLGGFSTI LAAVNFITTI LCMRAPGMTM FRLPIFTWNI LLVSILVLAV FPPLAAVLIA MEADRKLGAH IFDPEIGGAI LFQHLFWFFG HPEVYVLALP FFGIISEIIP AFSRKPIFGY IGMVGATLAI AGLSLAVWAH HMYTTGQVLL PFFSFLTFMI AVPTGIKFFN WVGTMWRGQL TFESPMLFSV GFLVTFLFGG LTGVMLAAPP MDFHLSDSYF VVAHFHYTLF GTVVFAMFAG FYFWWPKWTG KKLSEGWAKV HFWTLFIGFH ATFLVQHWLG VEGYPRRYAD YPDEFAALNM ISTVGAFLLS VSTLPFLWNV WITWRNGKKV EEDDPWGYCG SLEWATSCPP PRHNFTAIPR IRSERPAFDL HHPPLAATGA KEVEASAGDS S
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