Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcur_1915 |
Symbol | |
ID | 8603242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermomonospora curvata DSM 43183 |
Kingdom | Bacteria |
Replicon accession | NC_013510 |
Strand | + |
Start bp | 2263972 |
End bp | 2266419 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | SMC domain protein |
Protein accession | YP_003299522 |
Protein GI | 269126152 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00125008 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCCCGC TGCGCCTGTA CCTGGAGAAC TTCGGCAGCT TCCGCGCGCC GACCTCGGTG GACTTCCACG ATGTGGACTA CTTCGTGCTC GTCGGCCCCA CCGGCGCCGG CAAGAGCACC GTCATCGACG CGATCTGCTT CGCCCTCTAC GGCACGGTGC CGCGCTGGGG GGATGAAAAG AAAGTCGGCC TGGCGCTGGC CCCCTCGGCC ACCTCCGGCA AGGTCGCGCT GGTGTTCGAA GTGGGGGACC GGCGCTATGG GATCGTCCGC TCCCTGGTCC GCAACGCCCG CGGCACGGTC GCCACCCGCG AGGCCCGGCT GGATGAGCTC GACCCGTCCG CCGACCCCGC CCAGGACGTC ACCGCGCTGC TGGCCTCCCC GGTGCGCACC CTGGCCGAGG GCGACCACGT CACCGCCGAG GTCGAGCGCC TCACCGGGCT GGAGTACAAG TTCTTCACCC AGTGCGTGAT CCTCCCCCAG GGCCGCTTCG CCGAGTTCCT GCACGCCACC CCGAGCAAAC GCCAGGAACT GCTCGTCCAG CTGCTGGACG CGGGCGTCTT CGACGCCATC CGGCAACGCG CCGTCGAAGA GGAGAAGAAG GCCGCCGCGG CGGCCCAGGC CGCCGAAGAC CAGCTGGCCG CGCTCACCGA CGCCGACGAG GAGGCCGAGG CGCGCGCCCG GCGCCGCCTG GAGGAGCTGA CGGAGCTGGC CGAGCGGGTC CAAGGCTCCC TTGAGCGGCT GCGGGACCTG GACGGCCGCG TCACCGCGGC GGAAAGCGAG CTCAGCGCCG CCGACCAAGC CGTGCGGACA CTCGGCACCG TCGCGATGCC CCCGCACGTG CCCACCCTCG CCGACGACCT GCGCGCCGCC ACCGAACGGG CCGGGCAGCG GGCCGAGGAG GCCGAAAACC GCCGGCGAGC CGAGCAGCAG GCCTATGAGG AGCTGGCCGC CCTCGGCGAC AAGACCGCCC TGACCTTGGC TTTGAAAGCC CACGAAGACC ACGCCCGCCT CACCGGCCAG CTCGCCACCG CCCGCACCGG CCACCAGCAG GCCGTCGCGG ACGTCTCCCG GGCCGAAGAC CGGGTGCGGC AGGCGGAGGC CCGCCTGGAG GAGGCCGAAG CGCACCTGCA ACGCGTCCGC GACGCGCACG CCGCCGCCGA CCTGGCCCGG CGCCTCACCG TGGGCGAACC CTGCCCGGTG TGCCTGCACC CGGTGGCCGA GCCGCCCGCC CACCCCGAAC CGGCCGCCCT CCAGCAGGCC GAAGACGCCG TCCAAGGCCG CAAGGCGGAA CTGGAGCAGG CCCGCCGCCA CCACCGGCAC ACCCAGACCG TCGCCGACAA GGCCGAGCAG GCCGTCACAG ACCTGACCGG CCGCCTGCAG GCACTGGCCG AGCAGCTCCG CGCCCACCCC GACGCCGCCG AGCTGCGAAA GAAGCTGGCC GCCATCGAGG AGGCCGAGCA CGCGGCCCGG CGAGCCCGGC AGGAGGCCCA GCAGGCCCGC GCCGCCGCCG ACGACGCCGA ACGGCACCGC GCCAAGATCG CCGAAGAGGC CGCCGCGGCG CTGCGGAAAC TGGACGCCGT CCGCGACACC CTCGTCCCGC TGGGCGCCCC GCCCGTCGAC CGGCGGGACC TGCACGCCGC CTGGACCGCC CTGCTCACCT GGCGGGACCA GGAGCTGCAG CGGCGCCACC GGTCGCGCCG GGAAGCACAG GAACGGTTGG CCGCGGCGCG CGGCGAACGC GACCGGGAAC GCGGCGCGGT GCGCACCCTC CTGGAGGAGG GCGGCCTCAC CCCGCCCAAA GCGCTGGAAC CCGACGCCAT CGGGCGGGCC GTGGCCACCG CCCGCGCCCG CGCCGAAAGC GACCTGGAGG GCGTCCGGGA ACGGCGCCGC CAGGCCGCCG CGCTCGCCGG CAGGGCCGCC GAGCACCGGG AGGCCGCCCA GGTCGCCCAC GAGCTGGCGC TGCGGCTGCG GGCCAACAAC TTCGAAAGCT GGCTGTGCGG CGAGGCGCTG GAAGTGCTGG TGAGCGCCGC CTCCCAAACC TTGAAGGAGC TGTCCGACGG CCAGTTCGAG CTGGTGCTGG ACGCCCGCAA CACCATCGAG GTCATCGACT ACGCCGAGGC CGGGATGCGC CGCAACGTGC GCACCCTGTC GGGCGGGGAG ACCTTCCAGG CGTCGCTGGC GCTGGCGCTG GCCCTCTCCG AGCAGGTCGC CGGGCTGTCG GCGGGCGCCG CCCGCAGCCT GGAGTCGATC TTCCTGGACG AGGGGTTCGG CACCCTGGAT CCGGCGACGC TGGACACCGT GGCCGCCACG CTGGAGCGGC TGGCGACCGC CGGCGACCGG ATGGTCGGCA TCGTCACCCA CGTCCCGGCC CTGGCCGAGC GGGTGCCGGT GCGCTTTGCG GTCTCCCGCG ACGCCTCCGG CTCCCACCTG GAGAGGAGGA GTGCATGA
|
Protein sequence | MRPLRLYLEN FGSFRAPTSV DFHDVDYFVL VGPTGAGKST VIDAICFALY GTVPRWGDEK KVGLALAPSA TSGKVALVFE VGDRRYGIVR SLVRNARGTV ATREARLDEL DPSADPAQDV TALLASPVRT LAEGDHVTAE VERLTGLEYK FFTQCVILPQ GRFAEFLHAT PSKRQELLVQ LLDAGVFDAI RQRAVEEEKK AAAAAQAAED QLAALTDADE EAEARARRRL EELTELAERV QGSLERLRDL DGRVTAAESE LSAADQAVRT LGTVAMPPHV PTLADDLRAA TERAGQRAEE AENRRRAEQQ AYEELAALGD KTALTLALKA HEDHARLTGQ LATARTGHQQ AVADVSRAED RVRQAEARLE EAEAHLQRVR DAHAAADLAR RLTVGEPCPV CLHPVAEPPA HPEPAALQQA EDAVQGRKAE LEQARRHHRH TQTVADKAEQ AVTDLTGRLQ ALAEQLRAHP DAAELRKKLA AIEEAEHAAR RARQEAQQAR AAADDAERHR AKIAEEAAAA LRKLDAVRDT LVPLGAPPVD RRDLHAAWTA LLTWRDQELQ RRHRSRREAQ ERLAAARGER DRERGAVRTL LEEGGLTPPK ALEPDAIGRA VATARARAES DLEGVRERRR QAAALAGRAA EHREAAQVAH ELALRLRANN FESWLCGEAL EVLVSAASQT LKELSDGQFE LVLDARNTIE VIDYAEAGMR RNVRTLSGGE TFQASLALAL ALSEQVAGLS AGAARSLESI FLDEGFGTLD PATLDTVAAT LERLATAGDR MVGIVTHVPA LAERVPVRFA VSRDASGSHL ERRSA
|
| |