Gene Tcur_1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcur_1576 
Symbol 
ID8602897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermomonospora curvata DSM 43183 
KingdomBacteria 
Replicon accessionNC_013510 
Strand- 
Start bp1820924 
End bp1821586 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content74% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003299190 
Protein GI269125820 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.000134885 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGGCG CGCGGGAACG CTTTCCTGTG GCCGAGCCTT CCCAAGGGCG TCCGCTCCTG 
TCCGAAGAAC CGGGGGGCCA GGCGGCGGGA GAGGCGGAGC TCGAGGAGGC CCTGCAGGCG 
GCGCTCGACG GAGATGAGAC GGCGTTCCGG ATGCTTTACC GGGACATCCA GCCCAGGCTG 
CTCCGCTACC TGCGCATCCT GGTCGGTCCC GACGCCGACG ACGTCGCCTC CGACACCTGG 
CTGCAGATCG CCAGGGACCT GAAGGGCTTC CGCGGCGACT ACGACCGGTT CCGCGGCTGG 
TGCACTCGTA TCGCCCGCAA CCGCGCCATC GATCACCTGC GCAGGATCGG CCGCCGCCCC 
GGCACGAGCC TGCCGGTGGA GGAGCTCCCC GAGACGGCCG GCGTGCGCGA CGCCGAGACC 
GACGCGCTGG AGCGGCTGTC CACCGAGACG GCCATCACGC TCATCGCGCA ACTGCCGCGC 
GACCAGGCCG AGGCGGTGCT GCTGCGGGTG GTCGTGGGCC TGGACGCCAA GGCGGCGGGC 
CGGGTGCTGG GCAAACGGGC GGGCACCGTC CGCACCTCCG CCCACCGGGG GCTGCGCAGG 
CTCGCGGAGA TCCTCGGCCG GGAGCGCTCC GGGCGGCAAG CGGCGGGCGC GCCGCAGCCG 
TGA
 
Protein sequence
MDGARERFPV AEPSQGRPLL SEEPGGQAAG EAELEEALQA ALDGDETAFR MLYRDIQPRL 
LRYLRILVGP DADDVASDTW LQIARDLKGF RGDYDRFRGW CTRIARNRAI DHLRRIGRRP 
GTSLPVEELP ETAGVRDAET DALERLSTET AITLIAQLPR DQAEAVLLRV VVGLDAKAAG 
RVLGKRAGTV RTSAHRGLRR LAEILGRERS GRQAAGAPQP