Gene Tcur_0942 details

Gene Information

• Locus tag: Tcur_0942
• ID: 8602250
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermomonospora curvata DSM 43183
• Kingdom: Bacteria
• Replicon accession: NC_013510
• Strand: +
• Start bp: 1058044
• End bp: 1060212
• Gene Length: 2169 bp
• Protein Length: 722 aa
• Translation table: 11
• GC content: 71%
• Product: CRISPR-associated protein, Cse1 family
• Protein accession: YP_003298566
• Protein GI: 269125196

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCATCGG ACGTCAGTTT CGACTTGGCA CTGGAGCCAT GGGCGGAGGT CCGCTGGAAA 
GAAGCCGGAC CCGACCGCCC GTCAAGGCTC GGCCTGCGGG ACCTGCTCGT GCACGCCCAT 
GAGATCGAGG CGCTGGCCAT CACCCCTCCG CCCGCCCTCT CGGCGATGTA CCGGCTGCTG 
TATGCGCTCA CCGCCCGCGT CACCGGGCTG GACGAGAACC CCGACGGGGA CGGGGACTGG 
CTGGACCGGC GCGCGGAGAT CTTCGGCGAG CCCTTGGCCC CCGACGCCGT CGATGCCTAC 
TTCGCCGAGC ATGAAGGCAG GTTCGACCTG TTCCACCCGC AGCGGCCGTT CCTGCAGGAC 
CCCAGGCTGG CCGATCCCGC GGTGTGCCCG AAGAGCGCCG GCGTGAACAA GCTGGTCCTG 
GGACGCCCCG CCGGCAACAA CTCGGTGTGG TTCGGGCACC ACTGGGACGC CTCGCCCATC 
CCCGTCCCCA CGCCCGACGC CTTTCTGTCC CTGCTGGTCT GGCTTTACTA CGGCCCGTCC 
GGGCGCTGCT CCACCCGCAC CCACGCCGAC GTCACCGCCG CCGATGTGTC CGCCGGCCCG 
TTGCGGGGGA GCCTGTCCTA CCACCCCGAG GGCGACACCC TGCTGGAGAC CCTGCTGGCC 
GGGCTGACCC CGCCGCCCGA AGGCCTGCGC AGAGCAGACG ACCCCTGCCC CTGGGAACTC 
GCTGACCTGC CCGACCCGCT GGCCCCGCCG CGCACCCCCA ACCCTTACCC CGGTCCCTGC 
ACTCGCCTGA CCGGCGGCTG GCAGCATGCG TTGCTCCTGG TCCCCGACGA CACCGGGCGG 
CACGTCACCG ACGCCTACAT CACCTGGGGT CACCGCGGGA AGCTGCCCTC CACCAACGAC 
GCCTATGTGA TCTTCCAGAT CAGCAAGCAA GGCAACCTCT ACGCGCGCCC CGCCGATGCG 
GGACGCGCCC TCTGGCGCGA CCTGGACGGC CTGCTGGATC TGCCCACCAC CGCCACCGGC 
ACCCAGCCCC GGCGCCCCGC CGTGTTCGGC ACCGGCCTGG ATGATCTCGG CTCGTTCAAG 
GTCCGCGCCC TGGGCTTCGA GCAGGACGGC AAGACCAAGG ACATCCAGTT CATCTCGGCC 
GTCACCCCGC CGCTGCTCTT CCGCATCAAC GACGAGGACC TCGCCACCGC CCGTCGCATC 
GGCGACATGC GGACGGCGGG GGAGCTGTAC GGCGGCCGCC TCGAGTACGC CGTCAAACGC 
GCCTGGGCGG CCGTCGTCGA TGACAAGCCC AAGGACTGCG CCTGGGCGGA GCACGCCGCC 
GCCGCGTACT GGCCGAAGGC GGAAGAGATC TTCTGGACGC GGCTGCGCAA CCAGGACTAC 
GACCGGCACT GGCAGTCGTT CCGCCGCGTG GCGATCTCCG TGTTCGACCA GATCACCCGG 
GATCACGCCC GCGGCGCCCG CACCGCCCGC GCCATCGAGG AAGCCCGGCT GGAGCTTTAC 
GGCGGCGCCC GCAAAGCCAA GCGGAAGGAC CGCCGTTCCA CCTCATCGTC TTCGACCGCT 
CAGCAGGAAG CCATGACCGC CCAGCAGACA ACCGCCGTCC ATCCGTCCTT GGAGAGACCC 
CGCCGCTTCG TCGCCGAGGT CTTCCGCCTG TGCGAGGACC CCGGGAAACG CGCCGCCCTG 
CGCAGCGGCC TGGGCCGCCC CCTGGACGAG TGCCACCGCA TGCACAAGGT GATCGCCGCG 
AGGGTGCCCG AGGAACGGGA GACCGTCCAG CAGGCCTACT ACGCGATCGC CGCAATGATC 
GCTTCCCTGC CGCCGCAGGC CCGGGAGGCG CCGCCTTCCG ACGCCCTCAC CGGCCGCAGC 
TTCGGCCAGT GCCTCGCCGA AGGCGTGGGC CGCGGGCTCC TCCGCGAGAG CGCCGCCGAG 
GCCCGGCTGG ACCAGCTCAC CCGCCAGAGC GTGGACGACC TGCACCGCCG CCTGCCCGCG 
GCGGTCCGGA TCCTGGCGGA CCGGTCCTCC GCCGTTGACT GGGCCCAACT CCTGCTGGAC 
CTGGTCTGGT GGGAGGACGA CCGCGACCGG ATCGCGCGCC GCTGGCTGCA GGACTTCTAC 
CGCACCCGCT TCAAAGACGA ACTCAAAGCC GCCCAGGAGG CGGACGACGA CGAGCACGGT 
TCCCAATGA 

 

Protein sequence

MASDVSFDLA LEPWAEVRWK EAGPDRPSRL GLRDLLVHAH EIEALAITPP PALSAMYRLL 
YALTARVTGL DENPDGDGDW LDRRAEIFGE PLAPDAVDAY FAEHEGRFDL FHPQRPFLQD 
PRLADPAVCP KSAGVNKLVL GRPAGNNSVW FGHHWDASPI PVPTPDAFLS LLVWLYYGPS 
GRCSTRTHAD VTAADVSAGP LRGSLSYHPE GDTLLETLLA GLTPPPEGLR RADDPCPWEL 
ADLPDPLAPP RTPNPYPGPC TRLTGGWQHA LLLVPDDTGR HVTDAYITWG HRGKLPSTND 
AYVIFQISKQ GNLYARPADA GRALWRDLDG LLDLPTTATG TQPRRPAVFG TGLDDLGSFK 
VRALGFEQDG KTKDIQFISA VTPPLLFRIN DEDLATARRI GDMRTAGELY GGRLEYAVKR 
AWAAVVDDKP KDCAWAEHAA AAYWPKAEEI FWTRLRNQDY DRHWQSFRRV AISVFDQITR 
DHARGARTAR AIEEARLELY GGARKAKRKD RRSTSSSSTA QQEAMTAQQT TAVHPSLERP 
RRFVAEVFRL CEDPGKRAAL RSGLGRPLDE CHRMHKVIAA RVPEERETVQ QAYYAIAAMI 
ASLPPQAREA PPSDALTGRS FGQCLAEGVG RGLLRESAAE ARLDQLTRQS VDDLHRRLPA 
AVRILADRSS AVDWAQLLLD LVWWEDDRDR IARRWLQDFY RTRFKDELKA AQEADDDEHG 
SQ