Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_2705 |
Symbol | |
ID | 8569374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 3134569 |
End bp | 3136104 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | UDP-N-acetylmuramyl-tripeptide synthetase |
Protein accession | YP_003291964 |
Protein GI | 268318245 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.234649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGGTAG CTATCCCGAA ACAACCGATC CCATTGACCC GGGTGCTCCA GCGACTGGAG CGTGAGGGGC TGTTGCAGAC GGTCGTCGGA TCGGCGACCG CGCGGAAGCT CACGCACCTG ACGGACAACA GTCAGGAAGT GCAGCCGCGC GGGTTGTTTG TCGCCGTGCG GGGCGAGCGC GTCGATGGCC ACCGGTTCAT CGAGCAGGCC ATCGAACGGG GTGCCGTGGC CGTGGTGGGC GAATTCGTGC CGGAGGCGTT CGCCGAACGC TTTCCGAAAG CCTCCTTCGT ACAGGTGTCC AACAGCCGGC GGGCGCTCGG CATCCTGGCC ACGATCTTTC ACATGAATCC GGCCCGGCGG CTGCGTCTGA TCGGCATTAC GGGCACCAAC GGCAAAACGA CGACCGCTTT CCTGGTCTAC CACATGCTGA ACGCCATCGG TCAGGAAACC GGCCTGATCG GGACGGTCTG CTACCGGTTC GGCCGGCACG AGCTTCCGGC GTCGAACACC ACCCCGGGGC CCATCGAGCT GAACCACCTG CTGCGGCGCA TGACGGGCGT CCCCTGCAAG AACTGTGTGA TGGAGGTCTC CTCGCACGCG CTGGAGCAGG AGCGGGTGGC CGGCCTGTCG TTCTCCATCG CGGTCTTTAC GAACCTGACG CGCGACCACC TGGACTATCA CGGCTCGTTC GAGGCCTACC TGAAAGCCAA AAAGAAGCTC TTTGACGGGC TGACGTTTCG GGCCACGGCG CTTTACAACA TCGACGATCC CAGCGGCCCC GCCATGGTGG CCGACACGCA GGCCTGCTGC ATCAGCTATG GCCAGCGGGA AGATGCCCAG ATACGCATGC GCATTGTCGG CCACAGCCTG GAAGGCCTGA CGCTCAACAT TGACGGACGC TTTCAGCGCT TTCCGCTGGT GGGCTGCTTC AACGCCTACA ACCTGTTGGC CGCTTACGGG GTGGGACGGG CCATGGGACT GGATCCCGAC CTGCTGCTGG AGGCGCTGGG GCGCGTGCCG CAGATTCCCG GCCGCTTCGA ACGCTTCACG TTCGAAGACG GCACCACGGC TATCGTTGAC TATGCGCACA CGCCCGATGC GCTCGAAAAC GTGCTGCGCA CGATCCGCGA GGTGATGCCC GAAGGAGCGC GTCTGTGGTG CGTCTTCGGA TGCGGAGGCG AGCGCGATCG GGGCAAGCGG CCCATGATGG GCGCCGTGGC CGAGCGCCTG GCCGACTGCG TAATCGTTAC CAGCGACAAC CCGCGCTCCG AAGATCCGCT CCAGATTTTT GAAGACATTC GCCAGGGCAT GCGGCACCCC GAAGCGGCGC TGTGGGAGGT GGACCGGGCC CGGGCCATCG AACAGGCCGC GAAGCTATGC CGCCCGGGCG ATGTGGTGCT GGTGGCCGGT AAAGGGCACG AGGCCTATCA GATCATCGGC ACCGAAAAGA TTCCACTGGA CGATCGTCAG CTGGTGCAGG AATACTTCGA ACACTACCAC ACGCCGGCGC GTCCGCCTTC GATCCGGTTT CTGTAA
|
Protein sequence | MPVAIPKQPI PLTRVLQRLE REGLLQTVVG SATARKLTHL TDNSQEVQPR GLFVAVRGER VDGHRFIEQA IERGAVAVVG EFVPEAFAER FPKASFVQVS NSRRALGILA TIFHMNPARR LRLIGITGTN GKTTTAFLVY HMLNAIGQET GLIGTVCYRF GRHELPASNT TPGPIELNHL LRRMTGVPCK NCVMEVSSHA LEQERVAGLS FSIAVFTNLT RDHLDYHGSF EAYLKAKKKL FDGLTFRATA LYNIDDPSGP AMVADTQACC ISYGQREDAQ IRMRIVGHSL EGLTLNIDGR FQRFPLVGCF NAYNLLAAYG VGRAMGLDPD LLLEALGRVP QIPGRFERFT FEDGTTAIVD YAHTPDALEN VLRTIREVMP EGARLWCVFG CGGERDRGKR PMMGAVAERL ADCVIVTSDN PRSEDPLQIF EDIRQGMRHP EAALWEVDRA RAIEQAAKLC RPGDVVLVAG KGHEAYQIIG TEKIPLDDRQ LVQEYFEHYH TPARPPSIRF L
|
| |