| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_2585 |
|---|
| Symbol | |
|---|
| ID | 8569253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 3004695 |
|---|
| End bp | 3005702 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | thiamine pyrophosphate protein domain protein TPP-binding protein |
|---|
| Protein accession | YP_003291846 |
|---|
| Protein GI | 268318127 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGACCG GGCTTTCCTC CAACGGCGAA ACGATTCGCT TGAAGACGCT CAAAGAACTG
GCCGAGCGTG AACAGCGCGC GCTGCGCTTC CAGGGCGGCC ACTCGCTCTG CGCGGGTTGC
GGCGTGCCGC TGGTGGTGCG CACCGTGCTG AACGCCATCG ACACGCCCGT GGTCGTGGTC
AACGCGACGG GCTGCCTGGA GGTGGCCACC ACGCGCTATC CTTCGACGGC CTGGAACGTG
CCCTGGCTGC ACGTGGCCTT CGAGAATGCG GCCGCCGCCG CCAGCGGCGT GGAGGCTGCC
TTCCGGGTGC TCAACCGCAA ACGCAAAAAC GGCCGGCCGA TTCCCTTCGA CCTGCCCGAA
GACGTGCGCA TCATCGCCTT TGGCGGCGAC GGCGGCACCT ACGACATCGG GCTGCAGGCC
CTCTCGGGCG CCCTGGAGCG CGGGCACCGC TTCACGTACA TCTGCTACGA CAACGAAGCC
TACATGAACA CGGGCAACCA GCGGAGTGGC GCCACGCCCC CACTGGCCCA TACGACCACC
ACGCCCGTGG GCGAGCAGAG CCTGGGCAAA CTCCAGCAGC GCAAGGACCT GACGGAGATC
GCCGTCGCCC ACCACGTGCC GTATGTGGCC CAGGCGTCGA TCTCGAACTG GCAGGATCTG
GTGCGTAAGA TCCAGATGGC CGTGCAGGTG GACGGACCGA GCTTTCTCAA CGTACTGGCG
CCCTGCCAGC GCGGCTGGGG CTACGATCCG TCTCAGACCG TCGAGATTGC CCGCCTGGCC
GTCGAAACGT GCTTCTGGCC GCTCTACGAG GTGATCGACG GCGAGTACCG GCTGAACTAC
CGACCGCGCA AGCCGCTGCC CATCGCCGAA TGGGTCAAAA CGCAGGGACG CTTCCGTCAC
CTGCTCCGCC CGGAGAACCG ACACCTGCTC GACGCGCTGC AGGAGCAGGT CAACCGCGAA
TGGGAGCGGC TGCTGCGCAA ATGCGAAGGA CGCCTGCTGG AAGTGTAG
|
|---|
| Protein sequence | MMTGLSSNGE TIRLKTLKEL AEREQRALRF QGGHSLCAGC GVPLVVRTVL NAIDTPVVVV
NATGCLEVAT TRYPSTAWNV PWLHVAFENA AAAASGVEAA FRVLNRKRKN GRPIPFDLPE
DVRIIAFGGD GGTYDIGLQA LSGALERGHR FTYICYDNEA YMNTGNQRSG ATPPLAHTTT
TPVGEQSLGK LQQRKDLTEI AVAHHVPYVA QASISNWQDL VRKIQMAVQV DGPSFLNVLA
PCQRGWGYDP SQTVEIARLA VETCFWPLYE VIDGEYRLNY RPRKPLPIAE WVKTQGRFRH
LLRPENRHLL DALQEQVNRE WERLLRKCEG RLLEV
|
|---|
| |