| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_2576 |
|---|
| Symbol | |
|---|
| ID | 8569242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 2996091 |
|---|
| End bp | 2997305 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_003291837 |
|---|
| Protein GI | 268318118 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.581088 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAA AAACGCACTA CGAAGTGGTG ATTGTGGGGG GCGGAACGGC CGGCATTACG
GTGGCCGCGC GGTTGCGTCG CGCCAAAAAT CCGCCGGAAG TGGCGATTAT CGAGCCCTCC
ACAAAGCATT ACTACCAGCC GCTCTGGACG CTGGTGGGCG CGGGCGTCTT CCCACCCGAA
GCTTCGGTGC GGGACGAAGC CGACTACATC CCACCGGGCG CCACGTGGAT CCAGGATCGT
GTGGTGGCGC TCGACCCGGA CAACGATCGG GTGCAGACCG CCGGCGGCCG GACCATCGAA
TACGACTACC TGGTGCTGGC GCCGGGTATT CAGCTCGACT GGGACAAAAT CCCCGGCCTC
AAAGAATCGC TGGGCAAATA CGGCGTCACG AGCAACTACG CCTACGAGCT GGCACCCTAC
ACCTGGCAGG TGATGCAGCA GCTCAAGCCC GGCGACCGCG CGCTCTTCAC GCAGCCCTCG
ACACCGGTCA AGTGCGGCGG TGCGCCGCAG AAGATCATGT ACCTGACGGC CGACCACCTG
CGCCGCCGGG GGATTCTGGA CCAGGTGGAG ATTCATTTCT TCACGCCGGG CGTCGTGATT
TTCGGCATAC CGGAGTTTGC CCGGACGCTG GAGAAGGTGA TCGAACGCTA CGGCATTCAG
GTGCACTTTC GCCATGAACT GGCCGAGGTG CGGGGACCAC AGCAGGAGGC CGTCTTTCAT
CTGAAGGACG AACAGGGCAA CGTGCTCGAA GAGCGGGTGC ACCGGTTCAA CATGCTGCAC
GCCGTGCCAC CGCAGAGCGC GCCGGACTTC ATCAAGCACA GCAAGGTGGC CAACGCCGAG
GGATGGGTGG ATGTGGACAA ATACACGCTC CAGCACGTGC GCTACCCGAA CATCTTCGCG
CTGGGGGATG CGGCGGGTAC GCCCAATGCG AAGACCGGCG CGGCCGTGCG CAAGCAGGCG
CCCGTGGTGG TGCACAACCT GCTCCAGCTC CGGGAGCACG GAGCGCTCGT CAACCCGAAG
CACTACAACG GCTACAGCTC GTGCCCGCTG GTGACGGGCT ACGGCAAACT GGTGCTGGCC
GAGTTCGACT ACGACAACCG GCCCATGCCC TCGTTTCCGT TCGACACCAC GAAGGAGCGG
TACTCGATGT ACCTGCTCAA GAAGTACGTG CTCCCCTGGC TGTACTGGAA CCTGATGTTG
CGCGGAAAGG CTTAG
|
|---|
| Protein sequence | MAEKTHYEVV IVGGGTAGIT VAARLRRAKN PPEVAIIEPS TKHYYQPLWT LVGAGVFPPE
ASVRDEADYI PPGATWIQDR VVALDPDNDR VQTAGGRTIE YDYLVLAPGI QLDWDKIPGL
KESLGKYGVT SNYAYELAPY TWQVMQQLKP GDRALFTQPS TPVKCGGAPQ KIMYLTADHL
RRRGILDQVE IHFFTPGVVI FGIPEFARTL EKVIERYGIQ VHFRHELAEV RGPQQEAVFH
LKDEQGNVLE ERVHRFNMLH AVPPQSAPDF IKHSKVANAE GWVDVDKYTL QHVRYPNIFA
LGDAAGTPNA KTGAAVRKQA PVVVHNLLQL REHGALVNPK HYNGYSSCPL VTGYGKLVLA
EFDYDNRPMP SFPFDTTKER YSMYLLKKYV LPWLYWNLML RGKA
|
|---|
| |