| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_2528 |
|---|
| Symbol | |
|---|
| ID | 8569194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 2938058 |
|---|
| End bp | 2939443 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | ammonium transporter |
|---|
| Protein accession | YP_003291792 |
|---|
| Protein GI | 268318073 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.26052 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGACCA CTCGACGCTA CGCGCACGGG CTTCTGCTGA CCGCCCTGGG TCTTTTGCTG
GCCTCGCCGG TGCTGGCGGC CGACCCCTCG GGCAAGGCCA CGCTGGAGGC CGACCCGACC
GCTCCGGCGA ATTTCGTCTG GGTACTGGTA GCCGCCTTCC TGGTCTTCTT CATGCAGCCG
GGCTTCGCCC TGCTGGAGGC CGGCCTGACT CGGGCCAAAA ACACGGTAAA CATTCTCACG
AAGAACGTGC TGGACTTCTG CATGGCGGCG CTGGCCTTCT GGGCCTTCGG TTATGCGCTG
ATGTTCGGCG GTTCGGGCAT GGCGCCGGGA CTGGAGCAGG GCAACCCGTT CATTGGCTAC
TCGGGCTTTT TCCTGACCGG TGAAGCCTAC GACGTCAGCA CGATCCTGTA CTGGCTGTTC
CAGATGGTCT TTGCCGCCAC GGCCGCCACC ATCGTCTCCG GAGCCATGGC CGAGCGGACG
AAGGTGACGG CCTACCTGGC CTATTCTTTC CTGGTCAGCG CCCTCATTTA TCCGATCTAC
GGACACTGGG TCTGGGGCGG CGGCTGGCTT GGCGAGATGG GCGCGGTGGA CTTTGCCGGA
TCGGGCGTGG TGCATGCCGT CGGCGGCATC CTTGCCCTGA TCGGCGCCAA AAAACTAGGG
CCGCGCATCG GCAAGTACGA TGAGCAGGGA CGCCCCCGCC CCATTCCGGG CCACAACCTG
GCGCTGGCCA CGCTGGGCGT CTTCATCCTC TTCTTCGGCT GGTTCGGTTT CAATGCAGGA
AGCACGGTGG CGGCCACCGA ACTGCGCATC TCGGTGATCG CCACCAACAC GGCGCTGGCG
GCTGTGGCCG GGGGTGTGGC GGCCATGTAC CTGACCATGA TCCGCACGGG CCACGTCGAT
CTGCTGGCCA CGGGCAACGG CATCCTGGCC GGTCTGGTGG CCATCACGGC ACCCTGCGCC
TTCGTGGCTC CCTGGGCGGC CGTGGTCATC GGCGCGCTCG GGGGCGTGGT CATGCTCTGG
GCCGCGCACT TCGTCGAGCA TACCCTGAAA ATCGACGACC CCGTCGGTGC CTTCGCCGTG
CACGGAGCGG CCGGTCTGTT CGGAGTGCTG GCCGTGGGCA TCTTTGCCGA CGGCACCTAC
GGCGTCAGCG GTCTGATCGT GGGCGACACG CACCAGCTGC TGGTTCAGCT CATCAGCATC
GTGGCGCTGG TCCTGTGGAC GAGCCTCACC GGATGGCTGC TCTTCACACT GCTGGACAAG
GCGATGGGCC TGCGCGTCAG CCGCGAGCAT GAACTGGCCG GACTCGACGT GACCGAGCAC
GGCGTCTCGG CCTACGTCTT CGAAAACGGT CTGGCCGAAA AGCCGGGCAA AATGGTCGGT
GCCTGA
|
|---|
| Protein sequence | MRTTRRYAHG LLLTALGLLL ASPVLAADPS GKATLEADPT APANFVWVLV AAFLVFFMQP
GFALLEAGLT RAKNTVNILT KNVLDFCMAA LAFWAFGYAL MFGGSGMAPG LEQGNPFIGY
SGFFLTGEAY DVSTILYWLF QMVFAATAAT IVSGAMAERT KVTAYLAYSF LVSALIYPIY
GHWVWGGGWL GEMGAVDFAG SGVVHAVGGI LALIGAKKLG PRIGKYDEQG RPRPIPGHNL
ALATLGVFIL FFGWFGFNAG STVAATELRI SVIATNTALA AVAGGVAAMY LTMIRTGHVD
LLATGNGILA GLVAITAPCA FVAPWAAVVI GALGGVVMLW AAHFVEHTLK IDDPVGAFAV
HGAAGLFGVL AVGIFADGTY GVSGLIVGDT HQLLVQLISI VALVLWTSLT GWLLFTLLDK
AMGLRVSREH ELAGLDVTEH GVSAYVFENG LAEKPGKMVG A
|
|---|
| |