Gene Rmar_2350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2350 
Symbol 
ID8569015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2721667 
End bp2723526 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content66% 
IMG OID 
Productaspartyl-tRNA synthetase 
Protein accessionYP_003291616 
Protein GI268317897 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.613805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACC AGCACGGGCA CACGCTCGGC CGTGATCTGC ACGGCCCGCG CACGCACACC 
TGTGGCGAAC TCCGACGCGC GCACGTCGGC CAGGAAGTCG TGCTCAAAGG GTGGGTCGAT
ACGCGGCGCG ACCTGGGCGG CGTCATCTTC ATCGACCTGC GCGACCGCTA CGGGCTTACC
CAGATCGTCT TTTCTCCACA GGACAACGAG ACGGCCTATC GACTGGCCGA CCGTCTGCGC
AGCGAGTACG TGATCTCGGT GCGGGGCGTG GTGCGCGAGC GCTCGCCGGA GACCGTCAAC
CCCAAGCTCG CCACCGGTGA AGTCGAGGTC CGCGCCCATG ACCTGATCAT TCTCAACACC
TCCGAGCCGC TGCCGTTTCC GGTTTCGGCC CACGAGGAAA AGCGCACCAC GACCAGCGAA
GAGCTGCGCC TGAAGTACCG CTACCTTGAC CTGAGGCGGC CCGAACTGCA GCGCAACCTG
CTGCTGCGCC ACCAGGTCTA TCTGATCACC CGACGCTACT TCGACGCGCA TCAGTTCGTC
GAAGTCGAAA CGCCCGTGCT GACCAAATCG ACACCGGAAG GGGCCCGTGA CTTTCTGGTT
CCCAGCCGCC TGCACCCGGG CAAGTTCTAC GCGCTGCCCC AGTCGCCGCA GCTCTACAAA
CAGATTCTGA TGGTGGCGGG GCTGGATCGC TACTTCCAGA TCGTCAAATG TTTCCGCGAT
GAGGATCTCC GCGCCGATCG CCAGCCGGAA TTCACCCAGA TCGATGTGGA GATGACCTTC
CCCACCGAGG AGCAGATTTT TGAACTCATC GAAGGGCTTA TCCAGGCGAT CTGGCGCGAG
ACGCTGGGCG TCGAACTGCC GCGCCCCTTC CCGCGCATGT CCTACGACGA GGCGCTGCGG
CGCTTCGGCT CCGACAAGCC GGACACGCGC TTTGGCCTCG AATTGCAGGA AATCGGCGAG
GTCTTTCGCG GCTCCGGCTT CCGGGTCTTC GAAAGCGTTC TGGAGCAGGG CGGCGAAATC
GTGGCGCTGG TGGTGCCGGG CATGGGCGAC CAGGGCCGGG GCTACATGGA TCGCCTGGAC
AAAGACGTCG TGCGCAAGCA GATCGGCGCC GGCGGACTGG TCTACTTCAA GCTGCCTTCC
GACGGCGGCC CGATCTATTC CTCGGTCAAG GAGCACGTGC TCCCGTCGGC GTACGTCCAG
CGCGCCGTGG CGAAGCTCGG CGCCCGGGCG GGCGACCTGG TGCTGCTGCT GGCCGGTCCC
CGGCCGCAGG TGTACCTGCA GGCCGGTGCG TTGCGCCTGC ACATGGCCCG CGAGTTGAAT
CTGGTCCCGC CGGCCGGCCA GGCGCCCTGG CACTTCCTGT GGGTCACCGA CTTTCCGCTG
CTGGAATGGG ACGAAGAGGC CGGGCGCTAC TTCGCCATGC ACCATCCGTT CACCTCGCCG
CACCCGGACG ATCTGGACCT GCTGGAAACC GAGCCGGGCC GCGTGCGCGC CCGCGCCTAC
GACCTGGTGC TGAACGGCAA CGAAATTGGC GGCGGCTCGA TCCGTATCCA CCGGCAGGAC
ATCCAGCGCC GGATGTTTCG TGTGCTGGGC ATCGACGAGG AAGAAGCCGA GCGGCGCTTC
GGTTTCCTGC TGACCGCCTT TCGCTACGGG GCCCCGCCAC ACGGCGGCAT CGCGCTGGGC
CTGGATCGCA TCGTGATGCT GCTGGCCGGT GCCGGCTCGC TCCGCGACGT CATCGCCTTC
CCGAAGACGC AGCGCGGGCA GGAACTGATG TCGAACGCGC CCGACGAGGT CTCGCCCGAG
CAGCTCGAAG AGCTGCACAT TCGCGTGGTG CTGCCGGAGA CGGAAGCCTC AGGCTCCTGA
 
Protein sequence
MSDQHGHTLG RDLHGPRTHT CGELRRAHVG QEVVLKGWVD TRRDLGGVIF IDLRDRYGLT 
QIVFSPQDNE TAYRLADRLR SEYVISVRGV VRERSPETVN PKLATGEVEV RAHDLIILNT
SEPLPFPVSA HEEKRTTTSE ELRLKYRYLD LRRPELQRNL LLRHQVYLIT RRYFDAHQFV
EVETPVLTKS TPEGARDFLV PSRLHPGKFY ALPQSPQLYK QILMVAGLDR YFQIVKCFRD
EDLRADRQPE FTQIDVEMTF PTEEQIFELI EGLIQAIWRE TLGVELPRPF PRMSYDEALR
RFGSDKPDTR FGLELQEIGE VFRGSGFRVF ESVLEQGGEI VALVVPGMGD QGRGYMDRLD
KDVVRKQIGA GGLVYFKLPS DGGPIYSSVK EHVLPSAYVQ RAVAKLGARA GDLVLLLAGP
RPQVYLQAGA LRLHMARELN LVPPAGQAPW HFLWVTDFPL LEWDEEAGRY FAMHHPFTSP
HPDDLDLLET EPGRVRARAY DLVLNGNEIG GGSIRIHRQD IQRRMFRVLG IDEEEAERRF
GFLLTAFRYG APPHGGIALG LDRIVMLLAG AGSLRDVIAF PKTQRGQELM SNAPDEVSPE
QLEELHIRVV LPETEASGS