| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_2277 |
|---|
| Symbol | |
|---|
| ID | 8568942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 2648541 |
|---|
| End bp | 2649749 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | Mandelate racemase/muconate lactonizing protein |
|---|
| Protein accession | YP_003291544 |
|---|
| Protein GI | 268317825 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.612864 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCA CCGACGGAAA GGTGTTCGTC TGCTCGCCCG GCCGCAACTT CGTTACGCTG
AAGCTCTACA CGGACGAAGG CATCTACGGG CTGGGCGATG CCACGCTGAA CGGCCGGGAA
ATGGCCGTCG TCGCCTATCT CGAAGAACAT GTGATTCCCT GCCTGATCGG CCGCGATCCG
TTCCAGATCG AAGACATCTG GCAGTACCTG TACAAAGGGG CCTACTGGCG GCGCGGTCCG
GTCACGATGA GCGCCATCGC GGCCGTCGAT ATGGCGCTCT GGGACATCAA GGGCAAGGCG
CTGAACACGC CCGTTTACAA CCTGCTGGGC GGGCCCAGCC GCTACGGCGT GATGGTCTAC
GGCCACGCCA GCGGCGGCGA CATCGAAGAG GTCGTCGATG AGGTGGGCCG CTACCTGGAG
ATGGGCTACA AGGCCGTGCG GGCGCAATGC GGCATCCCGG GCCTGCCCAC CACCTACGGA
GTCGGGCGCG GAAAGCTCTT CTACGAGCCC GCCGAAAAGG GCCTGCCGCC CGAACACATC
TGGTCCACCG AAAAGTATCT GAACTTCATT CCCAAACTCT TCCAGCGCCT GCGCGACGTC
TACGGCGACG ACGTGCACCT GCTGCACGAC GTCCACCACC GGCTGACGCC CATCGAGGCG
GCCCGCCTGG GTAAAGAGCT GGAGCCCTAC CATCTGTTCT GGCTCGAAGA CCCGGTGCCG
GCCGAGCTGC AGGAGAGCTT CCGGTGGATT CGCCAGCACA CCACCACGCC GCTGGCCGTC
GGGGAGGTGT TCAATTCGAT CTACGACGCG CACCTGCTCA TCACCGAGCA GCTCATCGAC
TATCTGCGGA CGTCCGTCCT GCGCGGCGGC GGCATCACGC ACATGCGCAA AGTGGCGGCG
CTGGCCGAAC TCTACCACGT GCGCACGGGC TTCCACGGGG CGACGGACCT GTCGCCCATC
ACGATGGCGG CCGCGCTGCA CTTCGACCTG TGGGTGCCCA ACTTCGGCAT CCAGGAATAC
ATGCGCCACA CGCCCGAGAC CGACGAGGTC TTCCCGCATG CCTACTACTT CCAGGATGGC
TACCTGCATC CGGGCGATGC GCCGGGGCTG GGCGTGGACT TCAACGAGGA GCTGGCGGCG
CGCTATCCGT ACGAGCGCGC CTATCTGCCC GTCAACCGCA AGGAAGACGG CACCATGTTC
AACTGGTAA
|
|---|
| Protein sequence | MKITDGKVFV CSPGRNFVTL KLYTDEGIYG LGDATLNGRE MAVVAYLEEH VIPCLIGRDP
FQIEDIWQYL YKGAYWRRGP VTMSAIAAVD MALWDIKGKA LNTPVYNLLG GPSRYGVMVY
GHASGGDIEE VVDEVGRYLE MGYKAVRAQC GIPGLPTTYG VGRGKLFYEP AEKGLPPEHI
WSTEKYLNFI PKLFQRLRDV YGDDVHLLHD VHHRLTPIEA ARLGKELEPY HLFWLEDPVP
AELQESFRWI RQHTTTPLAV GEVFNSIYDA HLLITEQLID YLRTSVLRGG GITHMRKVAA
LAELYHVRTG FHGATDLSPI TMAAALHFDL WVPNFGIQEY MRHTPETDEV FPHAYYFQDG
YLHPGDAPGL GVDFNEELAA RYPYERAYLP VNRKEDGTMF NW
|
|---|
| |