Gene Rmar_2239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2239 
Symbol 
ID8568903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2601189 
End bp2602583 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content69% 
IMG OID 
Productflagellar hook-associated protein FlgK 
Protein accessionYP_003291506 
Protein GI268317787 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTGA ATCAACTGTT CAGCCTGACG CGCCGCTCGT TTCAGACGAT CCAGGCGGCG 
ATGAACACCG TCGGGCAGAA CGTAGCCAAT GCCAACACCG AAGGCTACGC GCGCCGGCGC
GTGACATTGC AGGCCGTCAA CATCCGGGAC ACGGGCATTT ATACAGCCCT TCCGCCCCGC
TCGGCCACCG GCCTGGGCGT TTCGGTGGCC ACCTACGAGC GCCTGCGCGA CCACCTGCTC
GACGTGGCCG CCTGGGACGC GCGCGCCAGC CTGGGTGCCG CCGACGAAGA AACGCGCATC
TATCAGGTGC TCGAAAGCCT GCTGGCCGCC GACGACGACA CCGGTCTGGC CGCCCTGCTG
AACGATTTCT GGAACCGCTG GAGCGACCTG GCCGACAACC CCACCGACAC GGGCGTCCGC
GAAGCGCTGC GCGGCCAGGC CCAGACGCTC ATCGACACGT TCCACCGGCT GGCCCGCGAT
CTGGACACGC TCACGATCCA GACCACCGAA ACGCTGCGCG ACGCCGTCGA TCAGGCCAAC
AGCTTGCTCG AAGAGCTGGC CTCGCTCAAC GCCACGATCC AGGCCGCCCG CCAGAAAGGC
AATCCGGATC TGGTGGCCGA AGACCGCCGC GACCAGCTCG TCCACGAACT GGCCGAACTG
CTCCCCGTCC AGGTGCATGC GCTGGAGGAC GGCTCCTACC AGCTCACCGT GGGCGGCATG
GCGCTCGTGC AGGGCGACCA GGTCATGCCG CTGACGCTGG ACCTGAGCGG CGGCACGCCC
TCGCTGACCT TCGGCAACAC GGGCATCGCC TTCCGGGCAC CCGAAGGGCA GGACGGCCGC
ATCGGCGCGC AACTGCGTAT GCTGACGCAG ACGATCCCCG ACGTGCGCCA GCGGCTCGAC
ACGCTGGCCG CCACGCTGGT CAATGAAGTC AACAGCCGAC ATGCGAGCGG TTACGGACTC
GACGGCCTGA CCGGCCGCGC CTTCTTCGAC CCGGCCGGCA CCACGGCTTC CACGATCGCC
CTGTCGGCCG ACGTGCTGGC CGACAGCCGC GCCATCGCCG CCTCGGGCGA CCCCACCGCC
CCGGGCGACA ACAGCGTCGC CCTCCAGATT GCCGGACTGC GCGACGCCCT GCTCTTCAAC
GGCGGCACCG AAACGGCCGA AACCTACGCG ATCAACCTGG CCGGCATCAT TGGCGCCGCC
GCGAAAGATG CCACCGGCCG CCTGGAGCGC TCGCGGGCGA CCATCGATCA CCTGGACGCG
CTCCAGCAGG GCGTCATGGG CGTCTCGCTC GACGAAGAAC TGACCAACAT GATCCGCTTC
CAGCAGGCCT ACGCGGCCAC CGCGCGCGTG CTGGACACCG CCCGGAGCAT GATGGACACG
CTGCTGAACC TCTGA
 
Protein sequence
MSLNQLFSLT RRSFQTIQAA MNTVGQNVAN ANTEGYARRR VTLQAVNIRD TGIYTALPPR 
SATGLGVSVA TYERLRDHLL DVAAWDARAS LGAADEETRI YQVLESLLAA DDDTGLAALL
NDFWNRWSDL ADNPTDTGVR EALRGQAQTL IDTFHRLARD LDTLTIQTTE TLRDAVDQAN
SLLEELASLN ATIQAARQKG NPDLVAEDRR DQLVHELAEL LPVQVHALED GSYQLTVGGM
ALVQGDQVMP LTLDLSGGTP SLTFGNTGIA FRAPEGQDGR IGAQLRMLTQ TIPDVRQRLD
TLAATLVNEV NSRHASGYGL DGLTGRAFFD PAGTTASTIA LSADVLADSR AIAASGDPTA
PGDNSVALQI AGLRDALLFN GGTETAETYA INLAGIIGAA AKDATGRLER SRATIDHLDA
LQQGVMGVSL DEELTNMIRF QQAYAATARV LDTARSMMDT LLNL