Gene Rmar_2226 details

Gene Information

• Locus tag: Rmar_2226
• ID: 8568890
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 2589493
• End bp: 2590095
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 63%
• Product: RNA polymerase, sigma-24 subunit, ECF subfamily
• Protein accession: YP_003291493
• Protein GI: 268317774

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.824868
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAGACG CTCCGGAAAC GCAGCCCACC TACGATCTGG AGGCACTGAA GCGTGGCGAT 
CCGGCCGCTT TTGAGGCGCT CGTGCGTGCA GAAAGCCCGC GTCTGTTTCG CTTCCTGCTG 
CGTTTTCTGG AGAATGAAGA GGATGCCCGT AACGTAATGC AGGAGGCATT TCTGCAGGCG 
TTTCAGCGAA TCGACACCTT CCGGGGTGAG GCGCGGCTGA CCACCTGGCT CTATGGCATT 
GCGCTGAACC AGGCCCGTGT GCTGCTACGC AAAAAACGCC GCTATGAGGC CATGGACGAG 
GCCGACCTGG ACCGGTTGCA GCCGACCTTT TCGCGAGGGA TGTACGCGCA GCGCCATCGG 
CCCTGGCCGC CGGACGTGCT GGCCGAGCGT GAGGACCTGC GGCGACTGGT CCGGGAGGCC 
ATCGACCGGC TGCCGGACAG CTACCGGGAA ATCATCCTGT TGCGCGACAT CGAGGAACTC 
TCTACCGAGG AAGTGGCCCG ACTGTTGAAC CTGAGCGAAG GGGCCGTGCG GGTGCGGCTC 
CACCGAGCCC GACAGGCATT GCGGGCCCTG CTCAGTCCGC ATATTGAAAA GGGTGACGTA 
TGA 

 

Protein sequence

MPDAPETQPT YDLEALKRGD PAAFEALVRA ESPRLFRFLL RFLENEEDAR NVMQEAFLQA 
FQRIDTFRGE ARLTTWLYGI ALNQARVLLR KKRRYEAMDE ADLDRLQPTF SRGMYAQRHR 
PWPPDVLAER EDLRRLVREA IDRLPDSYRE IILLRDIEEL STEEVARLLN LSEGAVRVRL 
HRARQALRAL LSPHIEKGDV