Gene Rmar_2223 details

Gene Information

• Locus tag: Rmar_2223
• ID: 8568887
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 2586935
• End bp: 2587714
• Gene Length: 780 bp
• Protein Length: 259 aa
• Translation table: 11
• GC content: 62%
• Product: Integral membrane protein TerC
• Protein accession: YP_003291490
• Protein GI: 268317771

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCGACT GGGTGACCAG TCCCGAAGCC TGGGCGGCGC TGGTCACGCT GACCGCGCTG 
GAGATCGTGC TGGGCATCGA CAACATCGTG TTCATCTCGA TCCTGTCCGG CCGTCTTCCT 
CGGCATCAGC AGCGCAAGGC CCGGCTGCTC GGACTCGGAC TGGCCATGGC CGGGCGTATT 
GCATTGCTGC TCAGCATCGC CTGGATCATG CGACTGACTG CGCCGCTGTT TGCGCTGCTG 
GGGCGGACGT TTTCCGGGCG CGATCTGATC CTGCTGGCGG GTGGGCTGTT TCTGATCGGT 
AAAAGCACGC ACGAAATCCA TCACCGACTG GAAGGGGTTG ACGAGGAAGC AGTCGATCGG 
GCGGCCGGAA CGGCGTCTTT CGCGGGCGTC ATCACGCAGA TTCTGCTGCT GGATCTGGTC 
TTTTCGCTGG ATTCGGTAAT CACGGCCGTG GGCATGGCCC GGCACGTGCC GGTCATGGTG 
GTGGCCATCG TGCTGGCCGT GCTCGTCATG ATGGTGCTGG CCGAAGGGAT TGCCCGGTTC 
ATTGAGCGGC ATCCGACGAT CAAGATGCTG GCGCTGAGCT TCCTGCTGCT GATCGGGGTG 
ATGCTGGTGG CCGAAGGCTT CGGGCAGCAC ATCCCGCGCG GGTACATCTA CAGCGCCATG 
GCCTTTTCGC TGTTCGTGGA GTTGCTGAAC ATCAAGGCCG GAGCACGTCG GGCGCAGCCC 
GTCCGCCTGC ACCAACCGGG CCTGAAGAAA GCACTGGAGA AGAGCACTTC AAAAAAATAA 

 

Protein sequence

MFDWVTSPEA WAALVTLTAL EIVLGIDNIV FISILSGRLP RHQQRKARLL GLGLAMAGRI 
ALLLSIAWIM RLTAPLFALL GRTFSGRDLI LLAGGLFLIG KSTHEIHHRL EGVDEEAVDR 
AAGTASFAGV ITQILLLDLV FSLDSVITAV GMARHVPVMV VAIVLAVLVM MVLAEGIARF 
IERHPTIKML ALSFLLLIGV MLVAEGFGQH IPRGYIYSAM AFSLFVELLN IKAGARRAQP 
VRLHQPGLKK ALEKSTSKK