| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_2215 |
|---|
| Symbol | |
|---|
| ID | 8568878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 2578353 |
|---|
| End bp | 2579165 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, GntR family |
|---|
| Protein accession | YP_003291482 |
|---|
| Protein GI | 268317763 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.587929 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACGC GCATGCTCCA ACCAGGAAAA CCCCGCCATC AGCAGCTCAG CGACTGGCTG
CGGGAGCAGA TCGAGCAGGG CGTTTACAAG CCCCAGGATC GGCTGCCGTC CGAGCACGAG
TTGAGTCGGC GTTTCGGTGT GAGCCGTATC ACGGTGCGGC GGGCGCTGCA GACACTGGAA
CACGAGGGCT TGATCTATCG CTGCCAGGGC GTCGGCTCTT TTGTGAAGCA ACCGGCACAC
ATCCAGCAGG GACTGGTACG TTTGACCGAC TTTGCCGAAG ACATGGCCCG GGCCGGGCTC
CAGGCCCGCT CGCAGGTCGT GCATTTTGCG TCGGAGCCGG CCTCGGCCGA GGTGGCCAGC
CGTCTGGGTG TGGCCGAAGG GGCCACGGTG GTGCGGTTGG ACCGCCTGCG GCTGGGCAAC
GACGAACCGG TCGCGTTCGA TCGCACCTGG CTGACGCCGT TCTACGCGCA GTTTCTGGAG
GGCAGAGATC TGGAGCACGA AACGATCTAC CGTATTCTGG AAGCGCTGGG CATCCCGATC
GTGCGCGGCT ACTATCGCAT CGCAGCGGTC AACGCCGAGG CCGACGTGGC CCGGCTGCTT
CGGGTGCCCG AGGGAACGGC ACTGCTCCGC ATCGACCGCA CTTCGTGCAC CAGCGGCAAT
AAGGTGGTGT ACTTCCAGCA GCGCTTTTAC CGGAGCGATC GGATCGTTTA CGAACTGGTG
CTGGAGCGCG ACAGCCGGCG CCGCATTCCG CCAGAAGAAG GGATGCCTTT GCGCGAATTT
GAACCGGTCT TTTTAAAACC GCTCGGCTCC TGA
|
|---|
| Protein sequence | MATRMLQPGK PRHQQLSDWL REQIEQGVYK PQDRLPSEHE LSRRFGVSRI TVRRALQTLE
HEGLIYRCQG VGSFVKQPAH IQQGLVRLTD FAEDMARAGL QARSQVVHFA SEPASAEVAS
RLGVAEGATV VRLDRLRLGN DEPVAFDRTW LTPFYAQFLE GRDLEHETIY RILEALGIPI
VRGYYRIAAV NAEADVARLL RVPEGTALLR IDRTSCTSGN KVVYFQQRFY RSDRIVYELV
LERDSRRRIP PEEGMPLREF EPVFLKPLGS
|
|---|
| |