Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_2180 |
Symbol | |
ID | 8568843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 2535983 |
End bp | 2537254 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | competence/damage-inducible protein CinA |
Protein accession | YP_003291447 |
Protein GI | 268317728 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.324051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCCG TTTTACTGAC CATCGGCGAC GAATTGCTTG CGGGCACCAC GGTCAACACG AACGCGGCCT GGCTGGGTGC CGAATTGACA GGGCGCGGCA TCACCGTGGT GCGTATCGAG GCGGTCGGCG ACGATCCGGA GGCCATCTGC CGGGCGCTCC GTCGGGCACG TGCCGAGGCT GAGGTGGTGA TCGTATGCGG GGGGCTGGGC CCCACGCACG ACGACCGAAC ACGTGAGGCG CTGGCCGACT GTCTGGGGCG CCCTCTGCAA TTGCGTCCGG AGCTGCTGGC GCAGATCGAA GCCCACTTCA GGCGCCGGGG GCGTGCCATG CCCGAGCGCA ACCGGGTACA GGCGCTTGTG CCCGAGGGCT TCGAGCCGAT TCCCAATCCG GTGGGTACGG CTCCGGGCCT GTGGCTGGAG GACGAAGCAG GCATCGTGGC GGTGCTGCCC GGCGTGCCGC ACGAACTGCA GACGCTGATG CGCGAGGTGG TGCTGCCGCG TCTGGCGCAG CGGCCCGGAC GACCGGCAAT CCTGCACCGC ATGCTGATCA CGACCGGCAT CGGCGAGTCG GACCTGCAGC AGCGCCTGGC CGGAGTGGAA TCGCTGCTCG ATGAACATAC ACGGCTGGCC TACCTGCCCG GACCCTACGG CGTGCGTCTG CGCCTGACCG TGGAAGCGCC GACGGCCGAA GCCGCCCGAG AGCGGCTGGC GGCGCTGGAA TCGTTCATCC TGGAGCGGAT CGGGGAGCGC TTCGTGGGTT TCGACGAAGA GACGCTGGAG GTCGTAGTGG GGCGGTTGCT CCGGGAGCTG GGAGCTACCG TGGCCGTGGC CGAGAGCTGC ACGGGCGGCC ATCTGGCCGA CTGCATTACC AGCGTCAGCG GTGCTTCCAC GTACTTCCGG GGCGGGGTGG TGGCCTACGA CAACGCGGTG AAGGTCGAAG TGCTGGGCGT CGATTCCGAG GTGCTGGCCC GCGAGGGAGC CGTCAGCGAA ATCGTGGCCA TTCAGATGGC GCAGGGCGTG CGCGAGCGGC TCGGTGCCCA GGTGGCACTC TCGACCACAG GAATTGCCGG ACCGACCGGC GGGACCCCGG ACAAGCCGGT CGGCACCGTC TGGATCGGCC TGGCCGATGC GCACTCGGCG TTTGCGCGAT GCTACTACCT GCCAGACGAA CGGCGACGCT TCAAGCAACG GGCAACGGCC GCCGCCCTGG ATCTTTTACG CCTTCATTTG CTTCAACAAA AGGTCACGAA GACCGCTTCG CAGTACGGGT GA
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Protein sequence | MKAVLLTIGD ELLAGTTVNT NAAWLGAELT GRGITVVRIE AVGDDPEAIC RALRRARAEA EVVIVCGGLG PTHDDRTREA LADCLGRPLQ LRPELLAQIE AHFRRRGRAM PERNRVQALV PEGFEPIPNP VGTAPGLWLE DEAGIVAVLP GVPHELQTLM REVVLPRLAQ RPGRPAILHR MLITTGIGES DLQQRLAGVE SLLDEHTRLA YLPGPYGVRL RLTVEAPTAE AARERLAALE SFILERIGER FVGFDEETLE VVVGRLLREL GATVAVAESC TGGHLADCIT SVSGASTYFR GGVVAYDNAV KVEVLGVDSE VLAREGAVSE IVAIQMAQGV RERLGAQVAL STTGIAGPTG GTPDKPVGTV WIGLADAHSA FARCYYLPDE RRRFKQRATA AALDLLRLHL LQQKVTKTAS QYG
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