Gene Rmar_2180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2180 
Symbol 
ID8568843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2535983 
End bp2537254 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content68% 
IMG OID 
Productcompetence/damage-inducible protein CinA 
Protein accessionYP_003291447 
Protein GI268317728 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.324051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCCG TTTTACTGAC CATCGGCGAC GAATTGCTTG CGGGCACCAC GGTCAACACG 
AACGCGGCCT GGCTGGGTGC CGAATTGACA GGGCGCGGCA TCACCGTGGT GCGTATCGAG
GCGGTCGGCG ACGATCCGGA GGCCATCTGC CGGGCGCTCC GTCGGGCACG TGCCGAGGCT
GAGGTGGTGA TCGTATGCGG GGGGCTGGGC CCCACGCACG ACGACCGAAC ACGTGAGGCG
CTGGCCGACT GTCTGGGGCG CCCTCTGCAA TTGCGTCCGG AGCTGCTGGC GCAGATCGAA
GCCCACTTCA GGCGCCGGGG GCGTGCCATG CCCGAGCGCA ACCGGGTACA GGCGCTTGTG
CCCGAGGGCT TCGAGCCGAT TCCCAATCCG GTGGGTACGG CTCCGGGCCT GTGGCTGGAG
GACGAAGCAG GCATCGTGGC GGTGCTGCCC GGCGTGCCGC ACGAACTGCA GACGCTGATG
CGCGAGGTGG TGCTGCCGCG TCTGGCGCAG CGGCCCGGAC GACCGGCAAT CCTGCACCGC
ATGCTGATCA CGACCGGCAT CGGCGAGTCG GACCTGCAGC AGCGCCTGGC CGGAGTGGAA
TCGCTGCTCG ATGAACATAC ACGGCTGGCC TACCTGCCCG GACCCTACGG CGTGCGTCTG
CGCCTGACCG TGGAAGCGCC GACGGCCGAA GCCGCCCGAG AGCGGCTGGC GGCGCTGGAA
TCGTTCATCC TGGAGCGGAT CGGGGAGCGC TTCGTGGGTT TCGACGAAGA GACGCTGGAG
GTCGTAGTGG GGCGGTTGCT CCGGGAGCTG GGAGCTACCG TGGCCGTGGC CGAGAGCTGC
ACGGGCGGCC ATCTGGCCGA CTGCATTACC AGCGTCAGCG GTGCTTCCAC GTACTTCCGG
GGCGGGGTGG TGGCCTACGA CAACGCGGTG AAGGTCGAAG TGCTGGGCGT CGATTCCGAG
GTGCTGGCCC GCGAGGGAGC CGTCAGCGAA ATCGTGGCCA TTCAGATGGC GCAGGGCGTG
CGCGAGCGGC TCGGTGCCCA GGTGGCACTC TCGACCACAG GAATTGCCGG ACCGACCGGC
GGGACCCCGG ACAAGCCGGT CGGCACCGTC TGGATCGGCC TGGCCGATGC GCACTCGGCG
TTTGCGCGAT GCTACTACCT GCCAGACGAA CGGCGACGCT TCAAGCAACG GGCAACGGCC
GCCGCCCTGG ATCTTTTACG CCTTCATTTG CTTCAACAAA AGGTCACGAA GACCGCTTCG
CAGTACGGGT GA
 
Protein sequence
MKAVLLTIGD ELLAGTTVNT NAAWLGAELT GRGITVVRIE AVGDDPEAIC RALRRARAEA 
EVVIVCGGLG PTHDDRTREA LADCLGRPLQ LRPELLAQIE AHFRRRGRAM PERNRVQALV
PEGFEPIPNP VGTAPGLWLE DEAGIVAVLP GVPHELQTLM REVVLPRLAQ RPGRPAILHR
MLITTGIGES DLQQRLAGVE SLLDEHTRLA YLPGPYGVRL RLTVEAPTAE AARERLAALE
SFILERIGER FVGFDEETLE VVVGRLLREL GATVAVAESC TGGHLADCIT SVSGASTYFR
GGVVAYDNAV KVEVLGVDSE VLAREGAVSE IVAIQMAQGV RERLGAQVAL STTGIAGPTG
GTPDKPVGTV WIGLADAHSA FARCYYLPDE RRRFKQRATA AALDLLRLHL LQQKVTKTAS
QYG