Gene Rmar_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2154 
Symbol 
ID8568816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand+ 
Start bp2509693 
End bp2510385 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content63% 
IMG OID 
ProductNADH (or F420H2) dehydrogenase, subunit C 
Protein accessionYP_003291421 
Protein GI268317702 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.818422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAAA ACGAACGTCC CAAAACGCAC GAAGCGCTGA AGTTCTACTT CACGCCCGTC 
GATCCGCCCC GTGGGGATGA GCTGAACCCC CACGCCAAGG CGACCACCTA CGTGCCCGAG 
GTGGTGGAAG CCCTGAAGGA GCGCTTCGGC GACGTGATCG AGGAGGTGGA GCTGTACGCG 
GGCGAGCATA CGGTGCGCGT CCGCGCCGAC AAAATCGTCG AGGTATGTCG CTTTCTGAAG 
GAAGAACAGG GCTTCAACTA CCTGGCCGAC CTGGGCGGCA TCGACCGCTT CACCGACGAG 
GGGCGCTTTG AGGTGTTCTA TAACCTGGTT TCCATCGAGC GGCGCAAGCG CATCCGCCTG 
AAGGTGCGCG TCGAAGAAGA CAACCCGGTG GTGCCTTCGG TGACGTCCGT CTACCGGGCG 
GCCAACTGGA ACGAACGTGA ATGCTACGAC ATGTTCGGCA TTTGCTTCGA AGGGCACCCG 
GACCTGCGGC GGATGTACAT GCCGGAGGAC TTCGAATACC ATCCGCTCCG CAAAGAATTT 
CCGCTGCTGG GCATCCCGGG CTCTCTGCCC CTGCCGCCCC AGACGCCGGG GGGTCCGCTG 
ACGCGCGACC CATTCCCACG GGCGCACGGC TACGTACCGC CGCCGGGCTT CGAGGAGCCT 
CCGGCCGAAG ACGAGGAAGT CTCCGAGCAT TGA
 
Protein sequence
MAKNERPKTH EALKFYFTPV DPPRGDELNP HAKATTYVPE VVEALKERFG DVIEEVELYA 
GEHTVRVRAD KIVEVCRFLK EEQGFNYLAD LGGIDRFTDE GRFEVFYNLV SIERRKRIRL 
KVRVEEDNPV VPSVTSVYRA ANWNERECYD MFGICFEGHP DLRRMYMPED FEYHPLRKEF 
PLLGIPGSLP LPPQTPGGPL TRDPFPRAHG YVPPPGFEEP PAEDEEVSEH