Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_2133 |
Symbol | |
ID | 8568794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 2490856 |
End bp | 2493138 |
Gene Length | 2283 bp |
Protein Length | 760 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | TonB-dependent receptor |
Protein accession | YP_003291400 |
Protein GI | 268317681 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.207681 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCAACG TTCGCTTTAC GCTGCTTCTG ATTTTCGGAC TTTCGCTGTC GGCGCGGGCG CAGGCGGTGT TGACCGGCCA GGTGCTCGAC GCCGAGACGC GCACGCCGCT TCCCGGCGCG CACGTGCTGA TCGACAGCAC CGCCCACGCC ACCGTTACCA ACGCGGCAGG TCTGTTCACG CTGCACCTGC CACCCGGCCG CTACACGGTC TCGGTGCGGT TTGTCGGATA CGAGACGACG CGGCGACCGG TCGAGCTGGT GGCGGGCGAT ACCGTGTTTG TGCCGATCCT GCTTCGGCCC GTCAGTTTCG AGCTGGAAGG CATTCAGGTG ACGGCCCTGC GGCCGGACCT CTCGCCCACG GCGCAGCTTC AGGAGGCTGC CGTGCGCGAG GCCAATCCGC GGGATGCCGG CGAGCTGCTC CGGGCGCTTC CGGGTCTGGC GGCCGTGCGA CGCGGGCCGC TCGGGCTCGA CCCGGTCGTC CGTGGCCTTC GGGAGACCGA GGTGGGCGTC TATCTGGACG GCTCGCGGCT CTTCCCGGCT GGTCCGGCCC GCATGGACTC GCCCATGAGC CACTTCGACC CCACGGTCAT CCAGTCGATG GAGGTGGTCA AAGGGCCCTA TGCGCTGACC TGGGGTGCCG GTAACCTGAG CGCCATCCGC GTCGAGACGC GCGGCCTCCG CACGCTCGCG CCCGGACGCA TGCAGGGGCG CCTGCACGCC GGTTACGACA CGAACCTGAA CGCCTTCGAA AACGGGGTGC AGCTCGGCTA CCGACAGGGC GCCTTCGGCC TGCTGGCGCA GACGGCCTGG CGGCAGGGCG CCGACTACCG GGCCGGCGAC GGCTCGACGG TTCCGGCCGA CTTCCGCTCG CGCGAGGTGC GGGTGAAGCT CGGCTACCTG CCACGGTCCG ACGTCCGGTT CGTCGTAGCC GCCGGCTATC AGGCTCAGCG CGATCTGGAC TACCCCGGCC TTATCCTGAA CGCCGACTAC TTCGACGCCT ACACGCTCTC GGCCAGCTTT CAGCGCACGT TCTCCGAGGG CCCCGTGCGC GGGTTGGACG TGCAGGCTTA TTACAACGCC GTCGATCACG GCATGGACAA CGACGGCAAG CCGACGGCCG AACCCAACCC CGAGCGCATG CCGCCCTTCG CCCTCGACGT GCAGATCAAT TCGGGGATCG ACGTCGTCGG CGGGCGGCTG GCGCTCAGCC TGGCGCCCGG CTTTGCCGAC GAACTGGAAA TCGGCGCCGA TGGCTACCAC ACCTATCGAA ACGCCATGCG ATGGATTCGC CGGCGCGACA CGGGCATGCT GCTTTTCGAG GACCTGGTCT GGCCGAAGGC ACGCATCACG GACGTCGGTC TGTTCGCCCG CCTGACCCAC AGCCCGGCCG CCCGCTGGCA GGTGGCTGCC ACGGCCCGGC TCGACCTGGT GGACGCCCGC GCCGACACGG CCAGTGCCTT TTTCCTCGAA AACGTCTCCA CCGACCTGAC GGCCCGCGAG GCCAACCTGA GCGGGGCGCT GACCGTAAGC TGGCTGCCCC ATCCGCGCTG GAGCGTGGCC GTCGGCGTGG GCTCGGCCGT ACGCACGGCC GACGCCACCG AGCGCTACTC GGACCGGCTG CCGTCGAGCA AGGCCCAGAT GAGCGCCGAA TTCGTCGGCA ACCCGGCGCT CCGGCCCGAG CGCAGCACGC AGGCCGACCT CTGGCTGGAA ACCGCCCATC CGAGCTGGAG CCTGTCGCTG AATCTGTTTG CCCGCCGTCT CGACAACTAC ATCACCATCG AGCCTACCGA CCTGCCCAAA CGGTTGCCGC TGAGCCCGCC CACCGTCTTT CGCTACGTGA ACGGCACGGC TACCTTCTAC GGCGGCGAGG CCACGCTGGC CGTGCGGCTA CCCTACGCGC TGACGCTCAC CACCACGGGC AGCTACCTGT GGGGGCAGGA CGAGACGCGC GACGAGCCCG CCTTTGGCGT GGCACCGCCT CGCGTGGACA TCGGCCTGCG CTACGAGCCG TCCGCCCGCT TCTTCGCCGA GGCCACCCTG CACCGGGTAG CCCGCCAGGA TCGCGTGGCC ACCAGCCGCG GCGAAGTACC CACCGACGGC TACACCACGC TGGACCTGAA GGCCGGCCTC CGGGTGCTCC GGCAGTGGCG GCTTCAGTTC GGCGTGCAGA ACCTGACCGA CGCGGCCTAC GCCGACCATC TGAACGCGAA AAATCCCTTC ACCGGCCAGC GCATTCCGGA GCCCGGCCGC GTGCTTTTCC TCGATCTGAC GCTGGCGTTC TGA
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Protein sequence | MRNVRFTLLL IFGLSLSARA QAVLTGQVLD AETRTPLPGA HVLIDSTAHA TVTNAAGLFT LHLPPGRYTV SVRFVGYETT RRPVELVAGD TVFVPILLRP VSFELEGIQV TALRPDLSPT AQLQEAAVRE ANPRDAGELL RALPGLAAVR RGPLGLDPVV RGLRETEVGV YLDGSRLFPA GPARMDSPMS HFDPTVIQSM EVVKGPYALT WGAGNLSAIR VETRGLRTLA PGRMQGRLHA GYDTNLNAFE NGVQLGYRQG AFGLLAQTAW RQGADYRAGD GSTVPADFRS REVRVKLGYL PRSDVRFVVA AGYQAQRDLD YPGLILNADY FDAYTLSASF QRTFSEGPVR GLDVQAYYNA VDHGMDNDGK PTAEPNPERM PPFALDVQIN SGIDVVGGRL ALSLAPGFAD ELEIGADGYH TYRNAMRWIR RRDTGMLLFE DLVWPKARIT DVGLFARLTH SPAARWQVAA TARLDLVDAR ADTASAFFLE NVSTDLTARE ANLSGALTVS WLPHPRWSVA VGVGSAVRTA DATERYSDRL PSSKAQMSAE FVGNPALRPE RSTQADLWLE TAHPSWSLSL NLFARRLDNY ITIEPTDLPK RLPLSPPTVF RYVNGTATFY GGEATLAVRL PYALTLTTTG SYLWGQDETR DEPAFGVAPP RVDIGLRYEP SARFFAEATL HRVARQDRVA TSRGEVPTDG YTTLDLKAGL RVLRQWRLQF GVQNLTDAAY ADHLNAKNPF TGQRIPEPGR VLFLDLTLAF
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