| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1941 |
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| Symbol | |
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| ID | 8568597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | - |
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| Start bp | 2266979 |
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| End bp | 2269690 |
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| Gene Length | 2712 bp |
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| Protein Length | 903 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | glycoside hydrolase family 2 sugar binding protein |
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| Protein accession | YP_003291212 |
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| Protein GI | 268317493 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.615536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATCT CCGGTTCTCG CTATCGGATG TTTTTAGGAG GCGGGCTGCT CCTGCTGCTG
ACGATCCTGC CATTGCAGGC ACAACCCGCG CAGGAGCTGC TGCGCGAGCG GGTTTTGCTT
AATGAAGACT GGCGCTTCTT CAAGTACCCC TCCCGGGCGG AAGCCGACGG ACTGGTCTAC
GACGTGTGGC CGATGTACCG GATGGATGCA GACACCGCCG GAGCACCGAA GGAGGCGATC
GTCCTTAAGC CCTGGATTCT GCCCACGGGC AATCCTTTCA TCAAAGATCC GGCCCGACGT
TACAGGCGAC CCCCGGGACA TCCCGGGCGT GACTTCCCGT TCGTGCAGCC GGACTTCGAC
GATAGCGGCT GGGAACGAGT AGACCTGCCG CACGACTGGG CCATTCGGGG CCCCTTCGTG
GAACAACCAC ATCCCGAGGT GGACGGCGGC ATGGGCTGGC TGCCCAGCCC GGGCGTGGCC
TGGTACCGGA AGAAAATCTT CATCCCGGCC GCCGATTCGG AGCGGGCGAT CTACCTGGAC
GTCGAGGGCG CGATGGCTCA CGCCGTCGTC TGGCTGAACG GCTACCTGGT GGGTGGCTGG
CCCTACGGCT ACGCTTCCTG GCGCGTGGAT CTGACCCCAT ACGTCCGCTG GGGCGCGGAA
AACCAGCTTG CCATCCGACT TGAGGTGCTT CCACGCTCGT CGCGCTGGTA TCCCGGCGGT
GGATTGTACC GCAACGTCTG GCTGGTCAAG ACGCATCCGG TGCACGTGGC GCAATGGGGC
ACGTTCGTGC GCACACCCTA CGTCTCGACC GACTCGGCCA CCGTTGTGCT GGATGTGACC
ATCGAAAACC GATGGGCCCG GGCCGTCTCG GTGCGCGTTA CGACAGAGAT CTTCGAGCTG
GGCGAAGAGG ACCGGCCACG GGGCGATGCC GTCGCCGCGT TCCCGCCCCG GCAGGTGCGG
GTACCGGCGC AGGGGCAGGC TACGGCGTCC GGCATGGCGA CGGTTCGCAA CCCGAAGCTG
TGGGGACCTC CGCCCACGCA GACGCCTCAC CGCTACGTGG CCGTCACCAC GCTGTGGCTC
GACGGCCGCC CGGTCGATCG CTACGAAACC CGCTTCGGCA TCCGCTCGCT GCGGTTCGAT
CCGGAGCGCG GGCTGCTGGT CAACGGCGAG CGCATCGAAA TCAAAGGCGT TAACCAGCAT
CACGACCTGG GGCCGCTGGG CGCGGCCTTC AACCGAAGGG CGGCCGAGCG CCAGCTCGAA
CTGCTGCGTG AGATGGGCGC CAACGCCATT CGTACCGCCC ATAACCCGCC AGCTCCCGAG
CTGCTGGAGC TTACCGACCG CATGGGCTTC CTCGTGCTCG ACGAGATCTT CGACGTCTGG
GAGATGCGAA AAACCCCGCT CGACTTCCAC CTGATCTTTC CGGACTGGCA CGAGCAGGAC
CTGCGCGCCT TTATCCGCCG CGACCGCAAC CACCCGTCGG TCATTCTCTG GAGCTTCGGC
AATGAAGTGG GCGAGCAGGG AAGCGGCCGC GAGGGGGCCG AGCTGGCCCG GCGACTGGCC
CGCATCATCA AAGAGGAGGA TCCCACGCGG CCGGTGACGG CGTCTATGAA TTTCGCCCGG
CCGGGGACGC CGATGCCCGA GGTGGTGGAC GTCATCTGCC TGAACTATCA GGGTGAAGGG
ATCCGGGACA TGCCGGCCTA TACTGGTTTG CAGGGGATCA CCACACCACC CCTTTACAGC
GCATTTCGCA TACATTTCCC TACAAAAATG ATTATCAGTT GTGAAAATGC GGCCGCTGTA
AGTTCGCGGG GCGCCTATCT CTTTCCAGTT ACAGATGCCC TGAGTGCACC TGTTCGTGAA
GGCCAGGGGG GTGATCCGGT TACCAGGCAG GTAAGCGGCT ATGAGCTATA TACGGCGGAT
TTTGGCTCTT CGGTGGACAA GGTGTTTTTC GTGCAGGAAC TCCATCCTTT TGTGGCCGGC
GGTTTCGTCT GGAGCGGCTG GGACTATCTG GGCGAGCCCA CGCCCTACTA CAGTTCGCGC
AGCTCTTATT TCGGGATCAT CGATCTGGCC GGTTTCAAAA AGGATCGGTT TTACCTGTAT
CAGGCCCGCT GGCGTCCCGA GCTACCGATG GTGCATATCC TGCCCCACTG GAACTGGCCG
GATCGCGTGG GGGAGATCAC GCCCGTGCAT GTGTTCACCT CGGGCGACGA GGTGGAACTG
TTCCTCAATG GCCGATCGCT CGGCCGCAAG AAAAAAGGGC CCTACCAGTA CCGCCTGCGC
TGGGACGACG TGCGCTACGA GCCCGGCGAA CTACGCGCCG TGGCCTATAA AAACGGCCGG
AAGTGGGCCG AAGCCGTCGT GCAGACCACC GGCCAGCCGA CCGCGCTGGC CGCCGAGGCG
GACCGTGTCC GGATCCAGGC CGACGGCTAC GACCTGGCAT TCATCACGGT GCGGGTGGTC
GATGCAGAAG GGCGAACCGT GCCCACGGCG GACAATCCGG TGCGTTTCAC CGTCGAAGGA
CCCGGCGAGC TGGTGGCCAC GGCCAACGGC GACCCGACCA GCTTCATTCC GTTTTCTTCG
GATGAGCGGC CGGCCTTCAA CGGGCTGGTG CTGGCCATCG TGCGCGCCCG GCGTGGCATG
CCCGGCACTA TTACCGTCAC GGCCAGCGCC CCCGGTCTGC GTCCGGCTCG TATCGTGATA
GAAAGCCAGT GA
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| Protein sequence | MRISGSRYRM FLGGGLLLLL TILPLQAQPA QELLRERVLL NEDWRFFKYP SRAEADGLVY
DVWPMYRMDA DTAGAPKEAI VLKPWILPTG NPFIKDPARR YRRPPGHPGR DFPFVQPDFD
DSGWERVDLP HDWAIRGPFV EQPHPEVDGG MGWLPSPGVA WYRKKIFIPA ADSERAIYLD
VEGAMAHAVV WLNGYLVGGW PYGYASWRVD LTPYVRWGAE NQLAIRLEVL PRSSRWYPGG
GLYRNVWLVK THPVHVAQWG TFVRTPYVST DSATVVLDVT IENRWARAVS VRVTTEIFEL
GEEDRPRGDA VAAFPPRQVR VPAQGQATAS GMATVRNPKL WGPPPTQTPH RYVAVTTLWL
DGRPVDRYET RFGIRSLRFD PERGLLVNGE RIEIKGVNQH HDLGPLGAAF NRRAAERQLE
LLREMGANAI RTAHNPPAPE LLELTDRMGF LVLDEIFDVW EMRKTPLDFH LIFPDWHEQD
LRAFIRRDRN HPSVILWSFG NEVGEQGSGR EGAELARRLA RIIKEEDPTR PVTASMNFAR
PGTPMPEVVD VICLNYQGEG IRDMPAYTGL QGITTPPLYS AFRIHFPTKM IISCENAAAV
SSRGAYLFPV TDALSAPVRE GQGGDPVTRQ VSGYELYTAD FGSSVDKVFF VQELHPFVAG
GFVWSGWDYL GEPTPYYSSR SSYFGIIDLA GFKKDRFYLY QARWRPELPM VHILPHWNWP
DRVGEITPVH VFTSGDEVEL FLNGRSLGRK KKGPYQYRLR WDDVRYEPGE LRAVAYKNGR
KWAEAVVQTT GQPTALAAEA DRVRIQADGY DLAFITVRVV DAEGRTVPTA DNPVRFTVEG
PGELVATANG DPTSFIPFSS DERPAFNGLV LAIVRARRGM PGTITVTASA PGLRPARIVI
ESQ
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