| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1866 |
|---|
| Symbol | |
|---|
| ID | 8568520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 2185070 |
|---|
| End bp | 2186233 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | aminotransferase class V |
|---|
| Protein accession | YP_003291137 |
|---|
| Protein GI | 268317418 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.733686 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACC CGAAAGACAT GGAAGCCGAT CGCAAGTTGC AGGCGCTGCG TCGGCGTTTT
CCGCACACGC GCACGCAGAT CTACCTGAAC CATGCCGCTA CGGGACCACT CAGCCGTCCG
GTGGTGCAGG CCGTTCGGCG CTACCTGCAG CAGCGGTACC TGGGTCCGAT CGACAATTAC
GAGGAGCTGG CGCCGATCAT CGACGAGACG CGCCGGCTCG TGGCCACGGT GCTGGGCACG
ACGCCCGATC GCATCGCCTT GGCGCCGAAC ACCTCCTCGG CGTTGGGGTT GCTGGCACAG
GGAATCGACT GGCGGCCGGG TGACCGGATT GCCATCCCGG CCTGCGAGTT TCCGGCCAAC
GTCTATCCGT TCATGAACCT GCAGCACCAG GGTGTGCAGA TCGACTGGAT TCCGCATCGG
GAAGGGACGT TTACCGTCGA GGACGTAGCC CGAGCGCTTA CACCGCGTAC CCGGCTGGTG
ACGCTGAGCT GGGTGCAGTT CCTGTCAGGA TTCCGGGTCG ATCTGGCGCA GATCGTTGCC
TGTTGCCACG AACGCGGCGT CTGGGTCAGC GTCGATGCCA TTCAGGGGCT GGGGGCTCTG
CCGATCGATG TGGAGGCGAC CGGGATCGAC TTTCTGGCGG CGGGCACGCA CAAGTGGCTG
ATGGGATTGC AGGGGCTGGC CGTCTGCTAC GTTCGGCCTG CATTGCAGGA AGTGCTTCGT
CCCCCGGCCG GCTGGCTGCA CGGTCCGGTG GACTGGAATC GATTTTTCGA CTATCGGCTG
GAATTCTATC CGGACGCCCG GCGTTACGAG ACGGGCACGT CCAACCAGGC GGCCATCGTG
GCGTTGCATG CTGCGTTGAA GCAGTACCTG GCGCTCGGGA TGGACTGGTG CGCGCGTCGG
GTGCTGGCAT TGCAACGGCA ACTGGCCGAG GGGCTCCGGC GGCTGGGACT GGCGCGCTAC
GGCACCGACG ATCCGGCGCA CACTTCCGGG ATCGTGACCG TGCGACATCC GCAGGCCGAG
GCGCTGGCGG CATTTCTCAA AGCGCAGCGG ATCATCGCTT CGGTGCGCAA CGGCATGTTG
CGCTTTTCGC CCACCTACTA CAACACGGCC GAAGAAATAG ACCGCACGCT GGAGACGGTG
GCCGAAGGGC TGCGGCGGAT ATAA
|
|---|
| Protein sequence | MSNPKDMEAD RKLQALRRRF PHTRTQIYLN HAATGPLSRP VVQAVRRYLQ QRYLGPIDNY
EELAPIIDET RRLVATVLGT TPDRIALAPN TSSALGLLAQ GIDWRPGDRI AIPACEFPAN
VYPFMNLQHQ GVQIDWIPHR EGTFTVEDVA RALTPRTRLV TLSWVQFLSG FRVDLAQIVA
CCHERGVWVS VDAIQGLGAL PIDVEATGID FLAAGTHKWL MGLQGLAVCY VRPALQEVLR
PPAGWLHGPV DWNRFFDYRL EFYPDARRYE TGTSNQAAIV ALHAALKQYL ALGMDWCARR
VLALQRQLAE GLRRLGLARY GTDDPAHTSG IVTVRHPQAE ALAAFLKAQR IIASVRNGML
RFSPTYYNTA EEIDRTLETV AEGLRRI
|
|---|
| |