Gene Rmar_1861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1861 
Symbol 
ID8568515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2174138 
End bp2175307 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content65% 
IMG OID 
Productsignal transduction histidine kinase, LytS 
Protein accessionYP_003291132 
Protein GI268317413 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.923195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCCT TGCACGAAGC AGAAAGCGCC GGCGCAGGAT TCCTGCGGCG ACGCTGGGTA 
GAGGTGCTGG TGATCTGGCT GTTCTGGACG TTTCTGGCGG TGCTGGTGGC GACGGGTAAA
CTGCTCGATC CCCGCTGGGC CGGACAGGAA GTGTCGCTGG TGCGCCGGCA GGTCCTGCAC
ATCTTTTCGG AATTTTATAC CTGGGCGCTG CTGACGCCGG GCATTTTCTG GCTGAGTCGC
CGACTGGCCT TCGATCGTCC CCAGTGGGCC GGTCGCTTGC TGCTCCTGCT GGGGATCGGG
CTGGCCGTGG CGCTGCTGAT GGAAATCTGG GTGGACTTTC TTTACCTCTA CGTCTATCAA
TTACCCTGGC GGCGTGGTCG TTTTGACCTG CTGGAAGGCA TTCGCCACTT CTGGTTCATC
AACGACCTGG TGACCTTCTT CGCCGTGCTG GCGGCCGGCT TTGCCCGGGA CTACTTCCTC
CGGTACCAGC AGCGCCAGCA GGAGGCCGCA CAGCTCCGGG CGCAGGCGGC CGACCTGCAG
GCGCGTCTGA CCGAAGCCCG GCTGCAGGCG CTGCGCATGC AGCTCAACCC GCACTTTCTC
TTCAACACGC TGCACGCCAT CTCGGCGCTG GTCGAGCGCG ACCCGAAGGG CGTGCGGCAC
ATGATCGCGC GCCTGAGCGA ACTGCTGCGC TACACGCTCG ACGAAAGCGG GGCGCAGGAG
GTGCCGCTGG CCCAGGAGCT GCGCTTTATG GAAGGCTACC TCGACATTCA ACAGATCCGC
TTTCAGGGGC GGCTGGAGGT GAAGCAGGAA ATCGATCCGG ACGTGCTCGA GGCGCTGGTG
CCGAATCTGA TCCTGCAACC CATCGTGGAA AACGCCATCA AGCACGGCGT AAGCCGCCTT
GAGACGACCG GCCGCATCAC GCTGCGCGCC TGGCGTGAAG GCGATCAGCT CTGGCTGTGC
GTGCGCGACA ACGGCCCGGG CCTCTCCGGC AACGGACAGG GGCAGGAAGG GCTGGGGTTG
CGCAACACCC GGGCCCGCCT GGAGGGACTC TACGGCGATG CCTACCGGAT GGAACTGCGT
CAGCCCCCGG AGGGCGGCAT GGAAGTCTGC ATCAGTTTGC CGTATCATAC GGCAGCCGAC
CTGCACGTGA GCGCCCATGC CGACGCCTGA
 
Protein sequence
MAALHEAESA GAGFLRRRWV EVLVIWLFWT FLAVLVATGK LLDPRWAGQE VSLVRRQVLH 
IFSEFYTWAL LTPGIFWLSR RLAFDRPQWA GRLLLLLGIG LAVALLMEIW VDFLYLYVYQ
LPWRRGRFDL LEGIRHFWFI NDLVTFFAVL AAGFARDYFL RYQQRQQEAA QLRAQAADLQ
ARLTEARLQA LRMQLNPHFL FNTLHAISAL VERDPKGVRH MIARLSELLR YTLDESGAQE
VPLAQELRFM EGYLDIQQIR FQGRLEVKQE IDPDVLEALV PNLILQPIVE NAIKHGVSRL
ETTGRITLRA WREGDQLWLC VRDNGPGLSG NGQGQEGLGL RNTRARLEGL YGDAYRMELR
QPPEGGMEVC ISLPYHTAAD LHVSAHADA