Gene Rmar_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1860 
Symbol 
ID8568514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2173351 
End bp2174151 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content66% 
IMG OID 
Producttwo component transcriptional regulator, LytTR family 
Protein accessionYP_003291131 
Protein GI268317412 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACGC CTGATCGTCC GCTGCGTGTC CTGATCGTCG ACGACGAGCC GCTGGCCCGC 
CAGCGCCTGC TGGACTTGCT CGAAGGCCGC GAGGACATCG AAGTGGCCGG ACAGGCCACG
AGCGGTCGGG AGGCCGTCGA GGCCATTCGC GCGCTGCAAC CCGACCTGGT CTTCCTCGAC
GTCCAGATGC CGGGCATGAC CGGGCTCGAC GTGGTGCGCG AGATCGGTCC CGAACAGATG
CCCGTGACCA TCTTCGTGAC AGCCTACGAT CAGTATGCGC TGAAGGCCTT CGAGGTGGCG
GCCATCGACT ACCTGCTCAA ACCCTTCGAC GACGAACGCT TCGAACAGGC GCTGGAGCGC
GCCCGCCGCC TGCTGAAACT CCGGGAAGTG GAGGCGCTGC GCGAGCGCCT GCTGCAACTT
CTGCAGGACG AGCGGCCGTC GGCACAACCG AAGCCTTCGA AATACCTGGA ACGCATTGCC
GTCGAAATGC GTGGCCAGGT GCGCGTCATT CCGGTCCGTC AGATCGACTA CATCACGGCC
AGCGGGCCCT ATGCCGAGCT GCACGTGGGC GATCAGGTGT ACGTGATCCG CGAGCAGATG
CAGATGCTCG AAGAGCGGCT CGATCCGGAG CTGTTCATCC GGATCCACCG CTCCGCCATT
GTGCGGATCG ACCTGATCGA CGTGCTGCTG CGCGGGGCCG GCGGTCGCTA TGCCGTGCGT
CTGAAAAACG GCGTGCGCCT GAAGGTCAGC CGCAGCCGCC GCGAAGCACT GGAGCGTCGG
CTGGGTCTGA ATGCCGGGTG A
 
Protein sequence
MPTPDRPLRV LIVDDEPLAR QRLLDLLEGR EDIEVAGQAT SGREAVEAIR ALQPDLVFLD 
VQMPGMTGLD VVREIGPEQM PVTIFVTAYD QYALKAFEVA AIDYLLKPFD DERFEQALER
ARRLLKLREV EALRERLLQL LQDERPSAQP KPSKYLERIA VEMRGQVRVI PVRQIDYITA
SGPYAELHVG DQVYVIREQM QMLEERLDPE LFIRIHRSAI VRIDLIDVLL RGAGGRYAVR
LKNGVRLKVS RSRREALERR LGLNAG