Gene Rmar_1789 details

Gene Information

• Locus tag: Rmar_1789
• ID: 8568441
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 2097537
• End bp: 2098322
• Gene Length: 786 bp
• Protein Length: 261 aa
• Translation table: 11
• GC content: 68%
• Product: ABC-2 type transporter
• Protein accession: YP_003291061
• Protein GI: 268317342

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGCCA CGCTGCTGAC CATCCGGATG CTCTGGTGGC GCGAGCTGGT CAAGTTCGTA 
CGGGATCGCG CCCGACTCTT CGGCGCCCTA GCGCAACCGC TCGGCTTCTG GCTGCTGCTG 
GGTCTGGGCT TTCACGGATC GATCCGGCTG GCGGGGCCGT CCGCGCCGGG CTCCTATCTG 
GCCTACCTGC TGCCGGGCAT CGTGGTGCTG ACGATCCTGT TCACGGCCAT TTTCTCCACC 
ATGGCCATCG TCGAGGAGCG GCGGAGTGGC CTGCTGCAGG CCGCGCTGGT AGCTCCCGTC 
CCCCGTACGG CTCTGGTGCT CGGCTACGGC CTGGGCGGCA CGACGCTGGC ATTGCTGGAA 
GCAGTACTGT TGCTGGGCCT GCTTCCTTTC GTTAACGGCG TCCACCTGAC CCCATCCGGA 
CTGGCGCTCA CGCTGGGCGT CAGCGTGCTG ACAGGACTGG CCTTTGCCGT GCTGGGCTTT 
GTGGTGGCCT GGCATGCGGC CTCCACGCGC GGCTACCACG CCGTAATGAA CGTGGCCTTG 
CTGCCGCTCT GGGCCCTTTC GGGCGCCGTC TTTCCGATCG AAGGCGCCGC CCCGGTGCTG 
CAGGCGCTCA TGCGCCTCAA CCCCGTCACC TACATGGTCA GCGCCCTGCG GCAGGGCCTG 
TTCGGTCCGG GCGCCGCCGG TGCAGTGGGT ACGCCCGCAG CCTGTCTGCT TATCACGCTG 
TTGTTCACCG TCGCGCTGCT CCTGCTGGCC GTACGCACCG TACGCCGCCC ACTTCCGCGC 
ACCTGA 

 

Protein sequence

MNATLLTIRM LWWRELVKFV RDRARLFGAL AQPLGFWLLL GLGFHGSIRL AGPSAPGSYL 
AYLLPGIVVL TILFTAIFST MAIVEERRSG LLQAALVAPV PRTALVLGYG LGGTTLALLE 
AVLLLGLLPF VNGVHLTPSG LALTLGVSVL TGLAFAVLGF VVAWHAASTR GYHAVMNVAL 
LPLWALSGAV FPIEGAAPVL QALMRLNPVT YMVSALRQGL FGPGAAGAVG TPAACLLITL 
LFTVALLLLA VRTVRRPLPR T