Gene Rmar_1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1787 
Symbol 
ID8568439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2095670 
End bp2096584 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content69% 
IMG OID 
Productprotoheme IX farnesyltransferase 
Protein accessionYP_003291059 
Protein GI268317340 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.50189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATC AGCCGCGTTC CCTGCTGGCC GCCCTGCCGC TTTCGGCCGA GCGACGCGTG 
CAGCTCCAGG CCTGCTGGGA GCTGACCAAG CCGGAGATCA CCTTCCAGGT GACGCTCTCG
GCGCTGGCCG GCTATCTGCT GGGCTGCCCG GAGGGACTGA ACGGCTGGCA CCTGCTGGGC
ACGCTGACCG GTACCGGTCT GACGGCGGCC GGCGTCGGCG CACTGAACCA CTACCTGGAG
CGGGACTACG ACGCGGCCAT GCGCCGGACG GCCCGCCGGC CGCTGCCTTC CGGACGCGTC
TCGCCCACCA CGGCCCGCTA TCTGGGCATG CTGCTGGTCT TTGCCGGGGT GGGCCTGCTC
TGCCCGGTGG CCAATGCGCT GACGGCCGCG CTGGCCATCG CCACCGTGTT GCTCTACCTG
TACGTGTACA CCCCGCTGAA GCGTCGCACG AAATACAACA CGCTGATCGG CACGATTCCG
GGCGCCCTGC CCGCGCTGGG CGGCTGGACG GCCGCCACGA ACAACCTGGA CGTGGGCGGC
TGGACGCTCT TTGCCATCCT GGCCGTCTGG CAGATGCCCC ACTTCCTGTC GCTGGCCTGG
ATGTACCGCA AAGACTACGA GCGCGCCCAC TACCGGATGC TGCCCGTCGT GGAGCCCGAC
GGCCGCTCGA CGGCCTGGCA GACGCTTGGC TTTACGGCGC TATTGCTGCC GCTGGGCGTC
ACGCCCTACT TGGTGGGCGT GGCCGGTCCG GTCTATCTGG TCGGCTCCAT CCTGCTGGGG
CTTTACTTCC TGCGGCCGGC TGTGGCTTTC TTCCGGACGC GCCACGTGCA GGACGCCCGC
CGCGTGCTGA TCGCGTCGGT GGTGTACATC CCGGCCCTGA CGGGCCTGAT CGTGCTGGAC
TGGCTGCTGC GCTGA
 
Protein sequence
MTDQPRSLLA ALPLSAERRV QLQACWELTK PEITFQVTLS ALAGYLLGCP EGLNGWHLLG 
TLTGTGLTAA GVGALNHYLE RDYDAAMRRT ARRPLPSGRV SPTTARYLGM LLVFAGVGLL
CPVANALTAA LAIATVLLYL YVYTPLKRRT KYNTLIGTIP GALPALGGWT AATNNLDVGG
WTLFAILAVW QMPHFLSLAW MYRKDYERAH YRMLPVVEPD GRSTAWQTLG FTALLLPLGV
TPYLVGVAGP VYLVGSILLG LYFLRPAVAF FRTRHVQDAR RVLIASVVYI PALTGLIVLD
WLLR