Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1779 |
Symbol | |
ID | 8568431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 2084718 |
End bp | 2086052 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | outer membrane efflux protein |
Protein accession | YP_003291051 |
Protein GI | 268317332 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0223897 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCGCT GGTTACCGGG CCTGCTGCTG GGCTTCGGAC TGGCGCTCGC GCTTCAGGCG CAACCCGTGC AGCTGACGCT GTCCGAAGCC GTCAGACAGG GGCTTCGGAC GCATCCCGAT CTGGCCGCCG CCGAAGCGGC CGTCGCGGCC GCACAGGCCC GCATCGGTCA GGCCCGCGCG GCCTTTCAGC CCCGGCTGCA GTTTTCGGCC GGCTATCAGC GGCTGAGCGA GATCACGCCG TTTGCCATCA CGATGCCGCT GCCGGGTGCC GAACCCATCG AGATCACGCC CAACATTCCG AATCAGTATC AATTGCAGCT TTCGCTGCAG CAGCCGCTGT TTCAGGGCGG ACGGCTACGG GCTCAGCTCG AGGCGGCGCG GCAGGAAGCG GCGGCGGCCG CTGCCGGGCA GCACGCCCGG CGCGAGGCGC TCGCCTATCG CATCGCCGCG GCCTACTGGC AGCACGTGGA AGCCGAAGCG CTGGCCCGTG CCGCCGAGGA GAACGTCCGA CGTCTGGAAG CGCACCTGCA GGACGCCCGC AACCGGCAGG CGCAGGGGCT CCTGCTCGAA AGCGAGGTGC TCGATGTGGA AGTCGCACTG GAGCAGGCCC GGCTCGAAGC GCTCCGGCAG CGGCAGGTGG CCCGACTCAC CGCCGTCACC CTGAGCAGCC TGGTGGGCCT GCCGCCGGAC ACGCCGCTCG TGCTATCGGA CCGGCCCGAC ACCGCCGCGC AGCCGGTGCC GTCGCTCGAC AGCCTGCGCG CGCTGGCCCT GCACCGGCGG CCCGACCTGG CCGCGCTCCG GCACACCATC GCCCGGGCCG ACGCACTGCG CTCCATGGCC CGGGCCGGCT GGTGGCCGCA GGTGACGCTC GTCGGGCGCT ACCTCTACGC CCGACCCAAC CCGCGCATCA TCCCGCTACA GGATCGCTTC GAGGAGACAT GGGAAGTCGG ACTTTCGCTC ACGCTTGACC TGTGGAACGG CCTGCGCACG CACCATCAGG TGGCCGAGGC CACGGCGCTG CGCCGCCAGG CCGAAGCGCA GGAGGCCGCC ACGCTGCGCA CGCTGGACGT AACGCTGGCG CAGGCGCGGC TCGGCGTCGA ACAGGCCTAC GAGCGGTTGC GCCTGGCCCG GCTGGTGGTC CGGCAGGCCG AAGCCCGGTA TGCGCTCGTG CGCGATCAGT TCGCCCAGGG GCTGCGCACC AGCCGCGACC GGCTCGATGC CGAAACGGCG CTGGCGCAGG CCCGCGCCCG GGAGATTCAG GCACAGACGG CCTGCGCGCT CGCCTGGCTG GCACTGTATC AGGCCACCGG TACGCTGACC GAACACCTGC CATGA
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Protein sequence | MLRWLPGLLL GFGLALALQA QPVQLTLSEA VRQGLRTHPD LAAAEAAVAA AQARIGQARA AFQPRLQFSA GYQRLSEITP FAITMPLPGA EPIEITPNIP NQYQLQLSLQ QPLFQGGRLR AQLEAARQEA AAAAAGQHAR REALAYRIAA AYWQHVEAEA LARAAEENVR RLEAHLQDAR NRQAQGLLLE SEVLDVEVAL EQARLEALRQ RQVARLTAVT LSSLVGLPPD TPLVLSDRPD TAAQPVPSLD SLRALALHRR PDLAALRHTI ARADALRSMA RAGWWPQVTL VGRYLYARPN PRIIPLQDRF EETWEVGLSL TLDLWNGLRT HHQVAEATAL RRQAEAQEAA TLRTLDVTLA QARLGVEQAY ERLRLARLVV RQAEARYALV RDQFAQGLRT SRDRLDAETA LAQARAREIQ AQTACALAWL ALYQATGTLT EHLP
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