Gene Rmar_1769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1769 
Symbol 
ID8568421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp2071867 
End bp2072574 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content64% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003291041 
Protein GI268317322 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.434129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGAAG TCTGGATCCT CACGCGACGC GAACTGCGGG CCTTCTTCGA CAGCCCGTCG 
GCCTACATTG TGCTGAGCGT GTTTCTGCTG ATCACAGGCT GGTTCTTCGG CAACAGCCTG 
TTCGTCGAGA ACGTCGCGTC GCTGCGATCG GTCTTCGACC TGGCGCCGGT GCTGTTCATG 
TTCTTCATTC CGGCGCTTAC GATGGGCACG TTCGCCGAAG AGCGCCGCGC CGGTACGATC 
GAACTGCTGC TGACGCTTCC GGTGCGTGAC GGACAGGTCA TCGCCGCCAA GCTGCTGTCG 
GTGGTGATCG TGCTGCTGGT GGCGCTGGCC CTGACCGGCG TCTATGTGCT GACGCTGGCC 
GTGCTGGGCG ATCCGGACAA CGGCGCCACG CTCGGCGGCT ATCTGGGACT GGCGCTGCTG 
GGCCTGTCCT GCAGCGCGCT GGGGCTGCTG GCCTCCAGTC TGACGCGCAA CCAGATCGTG 
GCCTTCATTC TGGGCTTTGC CATGATTTTC GGACTGTACC TGCTCGACAA GGTCACGATC 
TTCGTGCCGG GCTGGCTGGC CCCCATCCTG GAGTACCTGA GCATCGACTT CCACTACCGG 
AACCTGATGC GCGGCGTGAT CGACTCGCGC GACGTGCTCT ACTACCTGTC GCTGACGGCG 
TTTGCCGGTT TGCTGACCGC GTATCACCTG GCACGACGTC CGGAGTGA
 
Protein sequence
MREVWILTRR ELRAFFDSPS AYIVLSVFLL ITGWFFGNSL FVENVASLRS VFDLAPVLFM 
FFIPALTMGT FAEERRAGTI ELLLTLPVRD GQVIAAKLLS VVIVLLVALA LTGVYVLTLA 
VLGDPDNGAT LGGYLGLALL GLSCSALGLL ASSLTRNQIV AFILGFAMIF GLYLLDKVTI 
FVPGWLAPIL EYLSIDFHYR NLMRGVIDSR DVLYYLSLTA FAGLLTAYHL ARRPE