Gene Rmar_1712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1712 
Symbol 
ID8568364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp1986805 
End bp1987467 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content67% 
IMG OID 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_003290986 
Protein GI268317267 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0573115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAAGA AACCGATCGG CCGACTGCAT GTGCTCACGG ACTTTTACTT TCAGCAGCGG 
TATGGTCATG CCGAGCTGGC CCGCCTGGTG ATCGCCGGCG GGGCCGACAC CGTGCAGTTT 
CGCCAGAAGT TCGGCGGTAT CCGCCACAAA CTCTACGAGG CCCGGCGCAC GGCCGCCGTG 
TGTAAGGAGG CCGGCGTGCC GCTGATCATC GACGATCACA TCGACATCGC GCTGGCCGTG 
GAAGCTGACG GCGTCCACCT CGGACAGGAG GATTTTCCCG TCGCCGAAGC CCGGCGCATC 
CTGGGACCCG ACTTCATCAT CGGCGCCACG GCCACCACCG TCGAGCAGGC AGTGGAAGCC 
TGGCGGGCCG GCGCCGACTA CATCGGCTTC GGTCCGGTTT TTCCCACTTC GTCGAAAGCC 
AACCCGGCTT CGGTGAAGGG CATCGAAGGA CTGCGTCAGG TCTGCGAGGC CGTCCCCATC 
CCTGTGATTG CCATCGCTGG CATCACCGTG CAGCGGGTGC GCCCGGTGCT GGAGGCCGGC 
GCCTACGGGG TGGCCGTGAT GACCGCCATC ACGACCGCGC CAGATCCGCG GGCGGCCACC 
GCCCAGTTTC GCCTGGAGAT CGAATCGGTG CTGCGGGCAC TCCCGGAAAC GCCCCGAACA 
TGA
 
Protein sequence
MGKKPIGRLH VLTDFYFQQR YGHAELARLV IAGGADTVQF RQKFGGIRHK LYEARRTAAV 
CKEAGVPLII DDHIDIALAV EADGVHLGQE DFPVAEARRI LGPDFIIGAT ATTVEQAVEA 
WRAGADYIGF GPVFPTSSKA NPASVKGIEG LRQVCEAVPI PVIAIAGITV QRVRPVLEAG 
AYGVAVMTAI TTAPDPRAAT AQFRLEIESV LRALPETPRT