| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1708 |
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| Symbol | |
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| ID | 8568360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | - |
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| Start bp | 1981245 |
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| End bp | 1983137 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_003290982 |
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| Protein GI | 268317263 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.179311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGAAC GCATCTACAC GGCGCCACCC GATACGGGCA CGCCGGTGCT CGGTAAGACG
CTGCCGGACG TGCTCTACGA GGCGCTGGCG CGCTACGAGA ACCCGGCCTT CCTGAATCAA
CCGGCCGGAC CGGGGCGCTG GACGCCCATC TCGCTGCGCG ATTTTGCCGA GCAGGCCGAA
GCGCTGGCGC TGGGCCTGCA TGCGATGGGA CTGGAGCGGG GCGCCCACGT GGCCTTCTAC
ATGGAAAGCG ACGCCCACTT CTGCCTGGCC GACATGGCCT GCCTGATCGG TGGCCTGATC
GACGTGCCCA TCTACCTGAC GCACGCGCCC GAGTCGATTC ATTACGTCAT CGAGCATGCC
GAGGCCCGGG CGCTCGTCGT CTCGAACCGA GCATTGCTCG AACGCGTCGC GCCGCTGCTG
CGCGACCTGC CCGGCGTGCA GTTCGTCGTG GTGGCCGACG CGACCGGGCT GGACACGGAT
CGGGTGGAAG GGCGGCCGCT CTACACCTTC GCCCAGTTGC TGGAAGCAGG GCGGCAGCGC
CGGGCGGCCG ATCCGGAGGC CATCGCGCGG CTGCGGGCGC AGATCCGTCC GGGCGACCTG
GCCACCATCA TCTACACGAG CGGCACGACG GGGCGTCCCA AGGGCGTGAT GCTCTCCCAC
GAGAACATTT CGTTCAACGC GCTCACGTCC TTCAGCGGGA TCAAGCAGTA CCGGCCGGGG
CCGGACGGCG AGGTGGCCCT GTCGTTTCTG CCGCTGACGC ACGTTTTCGC CCGGACGCTC
TTCTACGGCT ACCTGTACTA TGCCACCAGC GTCTATTTCA CGACGCCCGA CGCCCTGCGT
GACGCGCTCC GGCAGGTGCG GCCCACGACG TTCGCCACGG TGCCGCGCGT GCTCGAGAAG
ATCTACGGGG CGCTGGTGGA GCGGGCGGCC GCCATGCCCG GCCTGAAGGG GCGGATCTTT
CGCTGGGCGC TGGACCTGGC CCGGCGCTAC GAGCTGGGGC GCGAGCCGCG GGGACTTTAC
CGGCTGCAAC TGGCCGTGGC CGACCGGCTG GTCTATCGCA AATGGCGGGA GGCCATGGGC
GGGCGCATCG CCTTCATCAT TGCGGGCGGG GCGGCCCTTT CGGCCGAACT GGCCAACATC
TTCGCGGCGG CTGGCATCCC GATCCTGCAG GGCTACGGCC TGACCGAGAC GAGCCCGGTC
ATCACCTACA ACCGCCCCGA GCTGAACCGG GCCGGCACGG TGGGGGTGCC CATCCCGGGC
GTGGAGGTGA AGATCGCCGA GGACGGCGAG ATTCTCACGC GCGGCCCCCA CGTCATGCTG
GGCTATTACA AAGACCCGGA GCGCACACGC GAGGTGATCG ACGAAGAAGG GTGGTTCCAC
ACGGGCGACA TCGGCTACTT CACTGAAGAG GGCTTTCTCG TTATCACCGA CCGCAAGAAA
GATCTGTTCA AGCTCTCGAC GGGCAAGTAT GTGATGCCCC AGCCGCTGGA GCAGCGCCTG
ACGGCCGATC CGCTTGTCGA GCAGGCGCTC GTGGTGGGAC CCGGTTACAA GTTCACGGCG
GCGCTCATTT TCCCGGATGA GGAAGCGCTT CGACGGCTGG CGCGGCGGCT CGGGCTCGAC
GCCAACCAGC CGCTCGAAAA GCTGGTACGC GAGCCGAAGA TCCTGGAGGT CTATCAGCAG
ATCGTCGATC GCGCCAACGA GGGGATGGAC CCCTGGGCCA CGATCAAGCG CTTTGTGCTG
GTGCCCGAGC GGCTTTCCAT CGAAGAAGGC ACGCTGACGC CCACGCTCAA AGTGCGGCGC
TCGGCGCTCT ACAAAAAGTA CGAGGCCCAG ATTCGGGCGC TCTACGAGGG TGCCGAGGCC
GAAGCACAGG AAGCGACAAC TCCTGAATCC TGA
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| Protein sequence | MGERIYTAPP DTGTPVLGKT LPDVLYEALA RYENPAFLNQ PAGPGRWTPI SLRDFAEQAE
ALALGLHAMG LERGAHVAFY MESDAHFCLA DMACLIGGLI DVPIYLTHAP ESIHYVIEHA
EARALVVSNR ALLERVAPLL RDLPGVQFVV VADATGLDTD RVEGRPLYTF AQLLEAGRQR
RAADPEAIAR LRAQIRPGDL ATIIYTSGTT GRPKGVMLSH ENISFNALTS FSGIKQYRPG
PDGEVALSFL PLTHVFARTL FYGYLYYATS VYFTTPDALR DALRQVRPTT FATVPRVLEK
IYGALVERAA AMPGLKGRIF RWALDLARRY ELGREPRGLY RLQLAVADRL VYRKWREAMG
GRIAFIIAGG AALSAELANI FAAAGIPILQ GYGLTETSPV ITYNRPELNR AGTVGVPIPG
VEVKIAEDGE ILTRGPHVML GYYKDPERTR EVIDEEGWFH TGDIGYFTEE GFLVITDRKK
DLFKLSTGKY VMPQPLEQRL TADPLVEQAL VVGPGYKFTA ALIFPDEEAL RRLARRLGLD
ANQPLEKLVR EPKILEVYQQ IVDRANEGMD PWATIKRFVL VPERLSIEEG TLTPTLKVRR
SALYKKYEAQ IRALYEGAEA EAQEATTPES
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