| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1695 |
|---|
| Symbol | |
|---|
| ID | 8568347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 1960104 |
|---|
| End bp | 1961189 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | permease YjgP/YjgQ family protein |
|---|
| Protein accession | YP_003290969 |
|---|
| Protein GI | 268317250 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTTGA TCGACCGCCA TATCGTCCGA CGCCTGCTGC TCGGCTACCT GTTTTTCACG
GGCGCCCTGA TCGTCTTTTT CATCGTGCTT CACTACGTGG AGTACATCGA CGACTTCATG
GACCGGGGCG CTTCGATGCG GGAGGTCTTT CTGGTCTACT ATCCCAGTTA CATCCCCGAG
ATTGTGCGGC TGACCTCACC GCTGGCGCTG TTTCTGGCAT GTCTGTATGT GACGGGGCGC
ATGGCGCAGG GGCTGGAGAT CGTGGCGCTG CAGATGAGCG GTGTTTCGCT CTACCGATTG
CTGCGCCCCT GCGTCGCGCT GGCGCTGATC GTTACCGGCT TCATGTTCTG GTTCAACGGC
TGGGTGGTGC CGGTGACGAA CCGCACCGTC GTGGCCTTCG ACGAGAAATA CCTGTCGAAG
ACCCCGCGCC AGTTCGATCT GAGCCACCTG CATCGTCAGG CGCGGCCCGG ACAGTTCCTG
TCGGTGGGGT ATTACGATCG CGAACGGCGC ATTGCCTATC GCATCGCACT GCAGCAATTT
GCAGAAGGCC GACGGCTCGC CTACCGGCTC GACGCCCCCC GCATGGAGTG GAACGACTCG
TTGCAGGCGT GGGTGGTGCC CGAAGGCATT GCGCGGCATT TCGAGCCGGA CGGACGCGAG
GTGCGCCGTC CGGTACGCCG CCAGCAACTG GATCTGCCGC TCTACCCGCG CGATCTGGCG
CGCACCGAGC GAGAGGTGGA GGCCATGACG CTGCCCGATG CGGCCGCCCA CCTGGCCGCC
CTGCGTCGCT CGGGAGCCGG TCACCTGGGA CGCCCGCTGG TGGCCTATTA CAGCAAGTTC
GCCTATCCCT TCGCCAACCT GATTCTGGTG CTGATCGGCG TGCCGCTGGC CTCCGTGCGG
CGGCGCGGCG GCCAGGCCGT CCAGATCGGC ATCGGGCTGG GCGTGGCCTT TGCCTACCTG
GCGCTGCAGA AGCTGATCGA ACCCTTCGGA TACACCGAGA CGTTGCCCCC GCTGCTGGTG
GCCTGGCTCC CGCACCTGGT GTTTCTGGCG GGCGCGCTGG TGCTCGTCGC CCGGACGCGC
ACCTGA
|
|---|
| Protein sequence | MTLIDRHIVR RLLLGYLFFT GALIVFFIVL HYVEYIDDFM DRGASMREVF LVYYPSYIPE
IVRLTSPLAL FLACLYVTGR MAQGLEIVAL QMSGVSLYRL LRPCVALALI VTGFMFWFNG
WVVPVTNRTV VAFDEKYLSK TPRQFDLSHL HRQARPGQFL SVGYYDRERR IAYRIALQQF
AEGRRLAYRL DAPRMEWNDS LQAWVVPEGI ARHFEPDGRE VRRPVRRQQL DLPLYPRDLA
RTEREVEAMT LPDAAAHLAA LRRSGAGHLG RPLVAYYSKF AYPFANLILV LIGVPLASVR
RRGGQAVQIG IGLGVAFAYL ALQKLIEPFG YTETLPPLLV AWLPHLVFLA GALVLVARTR
T
|
|---|
| |