Gene Rmar_1680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1680 
Symbol 
ID8568332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1942323 
End bp1943510 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content66% 
IMG OID 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_003290954 
Protein GI268317235 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.683784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGTGA CCACTGCCGA TATTACACTG ACGCCGGAAG AACTCCGGCG CTACAACCGC 
CACCTGATCC TGCCCGAAGT CGGCCTGGAA GGTCAGAAGA AGCTGAAGGC GGCCTCGGTG
CTGCTGGTCG GTGCCGGCGG CCTGGGCTCG CCGCTGGCGC TTTACCTGGC GGCTGCCGGC
GTGGGCCGCC TGGGCCTCGT CGACTTCGAC GTGGTCGACG AGACGAACCT GCAGCGCCAG
GTGCTACACG GCACGAAGGA TGTCGGCCGC CCCAAGCTGG AGTCGGCGCG CGATCGCATC
CTCGACATCA ATCCCTACGT GCAGGTAGAC CTCTACGAGA CGCGCCTGAC CAGCGAGAAC
GCGCTCGACA TCATCAAAGA ATACGACCTG GTGGCCGACG GGACCGACAA CTTCCCGACG
CGCTATCTGG TCAACGATGC CTGCGTCCTG GCCGGTAAAC CGAACGTCTA CGCTTCGATC
TTCCGGTTCG AGGGCCAGGT GTCGGTCTTC GGCACGCCCG ACGGGCCGTG CTACCGGTGC
CTCTACCCGG AGCCGCCGCC GCCCGGCCTG GTTCCCTCCT GCGCCGAAGG GGGCGTGCTG
GGCGTGCTGC CGGGTCTGGT GGGTACCATC CAGGCCACCG AGGTCATCAA GATGATCCTC
GGGATCGGGA CGCCGCTCAT CGGCCGACTG CTGCTGGTCG ATGCGCTGCA CATGCAGTTC
CGCACGCTCA AGGTGCGGAA GAACCCCGAG TGCCCGATCT GCGGCGAGCA CCGCACGATC
CATGAGCTGA TCGATTACGA ACAGTTCTGC GGCCTGCCCT CGCGCAACGG CGAGGCGGCC
GCGCAGCAGG CGGCCGAAAG CGAGGTGCCC GAAATCACGG TGCACGAACT GAAAGCCCGC
CTGGAGCGCG GCGACCGGCC GGTCATTCTG GACGTGCGCA AGCCGCACGA GGTGCAGATT
GCCAGCATCG GCCACGACCT GCTCATTCCG GTCGACGAGC TGCCCGAGCG GCTTTCGGAA
CTGGAGTCCT ACCGCGACCG CGAGATCGTG GTGTACTGCC GCTCGGGGGC GCGCTCGGCC
CGTGCCACGA AGCTACTGCG CGAGGCGGGC TTCCGCGACG TGAAAAACCT GAAGGGCGGC
ATCCTGGCCT GGAGCCAGGA GATCGATCCC AGCCTTCCTC AGTACTGA
 
Protein sequence
MPVTTADITL TPEELRRYNR HLILPEVGLE GQKKLKAASV LLVGAGGLGS PLALYLAAAG 
VGRLGLVDFD VVDETNLQRQ VLHGTKDVGR PKLESARDRI LDINPYVQVD LYETRLTSEN
ALDIIKEYDL VADGTDNFPT RYLVNDACVL AGKPNVYASI FRFEGQVSVF GTPDGPCYRC
LYPEPPPPGL VPSCAEGGVL GVLPGLVGTI QATEVIKMIL GIGTPLIGRL LLVDALHMQF
RTLKVRKNPE CPICGEHRTI HELIDYEQFC GLPSRNGEAA AQQAAESEVP EITVHELKAR
LERGDRPVIL DVRKPHEVQI ASIGHDLLIP VDELPERLSE LESYRDREIV VYCRSGARSA
RATKLLREAG FRDVKNLKGG ILAWSQEIDP SLPQY