Gene Rmar_1638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1638 
Symbol 
ID8568290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp1899484 
End bp1900026 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content66% 
IMG OID 
ProductCRISPR-associated protein Cas4 
Protein accessionYP_003290912 
Protein GI268317193 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.270939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGCGC TTTCCATTAC CGGCACGCTG GTGAACTACT ACGTGCTCTG CCGGCGCAAG 
GCGTGGCTGG CCGTGCATGG ACTCTGGATG GAGCAGGAGT CGGAAGCCGT GGCACTGGGA 
CGCCTGCTGG ACGAGACCAC CTATGCCGAG GAGTTGCAGC ACGTGAACGT GGAAGCGGAC 
GGTCCCGCAG GGCTCCGGCT GGCCGGACGC ATCGACTGGG CCGAGCTGCG CGATGGCGTG 
CTCCACGAGA CGAAACGGAG TCCCTCCGGC CTCGAAGCGC ACCGCTGGCA GCTCCGCTTC 
TACCTGTGGT TGCTCAAGCT CCGGGGTGTG ACGCGGCCTG ACGGCCAGCC CTTCGAAGGC 
CAGCTCAACT TTCCCCGCCA GCGCCGCACC GAAACCGTCA CGCTCACCGC AGACGACGAA 
GCCCGGCTGC GCACGCTCGT GCAGGAACTG CGTCAGACGG CCGCCCGACC CACACCACCA 
TCCCGCCTCG AAAACCGCCG CTTCTGCAAA AAATGTGCGT ACGAGGAGTT ATGTTTTGGG 
TGA
 
Protein sequence
MPALSITGTL VNYYVLCRRK AWLAVHGLWM EQESEAVALG RLLDETTYAE ELQHVNVEAD 
GPAGLRLAGR IDWAELRDGV LHETKRSPSG LEAHRWQLRF YLWLLKLRGV TRPDGQPFEG 
QLNFPRQRRT ETVTLTADDE ARLRTLVQEL RQTAARPTPP SRLENRRFCK KCAYEELCFG