Gene Rmar_1633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1633 
Symbol 
ID8568285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1893345 
End bp1894802 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content51% 
IMG OID 
ProductCRISPR-associated RAMP protein, Csm5 family 
Protein accessionYP_003290907 
Protein GI268317188 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.63126e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCTA TGCCGCATAC AGTTCGTCGG ATTGCAGAGC GGGTGCAGGC TGTCCTGGAA 
GTACTTACGC CCGTCCATAT AGGCTGTGGG ATCAGGTGGC AGAAGAATCT CGACTTTGTT
GTAGACAAAG AGACGTATGT AATTCCCGAG CATGTCCTGA TGACCTATCT GCAGGAGCAT
CCTGAGTCGC TGGCGGACTT TGAGGATGAA CAGAGGCGTG CGGAATTGCT GTGGGAGACT
GAGGGAGGAA TTGAGTATGA ACTACCCTGT CGCAGCAGGG AAATTCTAGT TTTTATGCGG
AATGGCAATG GGCAACCCTA TGTGCCGGGA TCGTCGCTCA AGGGGGCACT GCGCACGGTG
ATTTTTCGAC ATTTCTGGGA ACAATTAGAC CAGGGTCGTA AGCAGCGGTT GCTGGCGAAA
ACTGGCGAAA AAAGGGAGTC GGCAGCGCAA CCGCTGGTTC GTGAAGTGCT GGGCCGTGAC
CCCAATCATG ACCTGTTGCG TGTGCTGGCC GTGTTCGACA CGCCTGTGCA TCAGGAAGAT
CTTGACCTGT ACCGGTTGTT CATTCTAAAC CTGACCGATC CGAAAGGCAG ACGCTACGGA
TGGCGTAATG TACCACGAAA GCGCTCCTTT AGTGATATCC GTGACGCTAC TCCAATTTAC
GCCGAGATGC TCAGGCCTGG TACGCAGGGT GTTTTGTCGT TGCGGCTGGA TCGTTTCCTT
CTGGATGATG AACGGGCCGA GCGGGAATTA CATTTTAGCG ATAAGTTAAG CCTGGAGCAG
TTAGCACGCT GGGCAAATCG CCATGCTCGG CACCTGCTGA AACGCGAACA GGCCTTTCTG
GAACAATGTG GCAATGGGAG ACTGCAGCGA TTGCTCGACA GTATTGACAG TTTGGTGCAG
TTGATTCCGG CCGAAGATAC GCCGGAAGAG GGCAAACGCT TTCTGCTACG TCTGGGATGG
AGTAGCGGAT GGCGATCAAT GACAGGCGAT TATCTTGAAG AGGAAAACCT GAATGAGATT
CGAAAAAAAT ATGGTCTGAA TTACGACAGA AATAAAAATC AACTCAGATT CCCTGTTTTC
CCAAAAACGC GAAAGATTGT CTTTGATGGA GAGGAGCCAT CCTGGTTGGC CGGCTGGGTT
CAGATCAGGT TGGATGCTGA CATTCAGCAA GCGAAAAAGT CAGCGTCCGA AGTGGATACA
GAGGCGAGGT CTTCGCGTCC ACAAATGGAA ATCACTACTT CAGGAGATGT CCCTCAGGAT
TATGAGACCG GCGTAGTACA CAATCTGAAA CTCAGCAAAG GATACGGCAC GATTTTATCA
GACAAGGGCG GTGAACCAAT TCGGTTTGAT TTTGCAACCG CAGATATGAC CGGCCTGGAG
AAAGGCGCTC GGGTACGCTT TCGTCTGGTA AAGGAAGAAA ATCAATACCG CGCTGTTGAT
GTCAAAAAGG TGAATTGA
 
Protein sequence
MEAMPHTVRR IAERVQAVLE VLTPVHIGCG IRWQKNLDFV VDKETYVIPE HVLMTYLQEH 
PESLADFEDE QRRAELLWET EGGIEYELPC RSREILVFMR NGNGQPYVPG SSLKGALRTV
IFRHFWEQLD QGRKQRLLAK TGEKRESAAQ PLVREVLGRD PNHDLLRVLA VFDTPVHQED
LDLYRLFILN LTDPKGRRYG WRNVPRKRSF SDIRDATPIY AEMLRPGTQG VLSLRLDRFL
LDDERAEREL HFSDKLSLEQ LARWANRHAR HLLKREQAFL EQCGNGRLQR LLDSIDSLVQ
LIPAEDTPEE GKRFLLRLGW SSGWRSMTGD YLEEENLNEI RKKYGLNYDR NKNQLRFPVF
PKTRKIVFDG EEPSWLAGWV QIRLDADIQQ AKKSASEVDT EARSSRPQME ITTSGDVPQD
YETGVVHNLK LSKGYGTILS DKGGEPIRFD FATADMTGLE KGARVRFRLV KEENQYRAVD
VKKVN