Gene Rmar_1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1576 
Symbol 
ID8568228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1833065 
End bp1833604 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content65% 
IMG OID 
Product2'-5' RNA ligase 
Protein accessionYP_003290851 
Protein GI268317132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCGTC TGTTTGTTGC ACTGGACCTG CCGGAAGATC ATCGCCGCCG GCTCTATGCC 
CTGCGCGATC CCTCCTGGAA AGCACGCTGG GCCACGCCGG ACCAGTTTCA CCTGACGTTG
CGCTTTCTGG GTCCCGTCGA GGAAGACCTG CTACCTGAGC TCACGCGGAC GCTGGCCGAA
ATCGAAGCCC CGGCCTTCGA ACTGGCGCCC CGGGGCCTGA TGGTCCTGCC CTCCCTGACC
CGTCCGCGCG TGCTGGCCGC GGCCGTCGAT CCAGTGCCGG AACTGCACGC GCTGCAGGCC
GAAATCGAAC GGCGCGTGGT CGATCTGGGT TTTACGCCGG AAGATCGGCC GTTCCGGCCG
CACATCACGC TGGCCCGCCT GAAGCAGGTC CCGACCGCCG CCGTACGGTC GTTCCTGCAG
CGACATCGCG ACTTTGCGCT GACGCCGTTT CCGGTGCGGG CCTTTCATCT GTACGAAAGC
CATCTGCATC CCGATGGGGC ACGCTATGAA ATTCTCCACC GTTTTCCGCT TCAGCCTTAA
 
Protein sequence
MLRLFVALDL PEDHRRRLYA LRDPSWKARW ATPDQFHLTL RFLGPVEEDL LPELTRTLAE 
IEAPAFELAP RGLMVLPSLT RPRVLAAAVD PVPELHALQA EIERRVVDLG FTPEDRPFRP
HITLARLKQV PTAAVRSFLQ RHRDFALTPF PVRAFHLYES HLHPDGARYE ILHRFPLQP