Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1576 |
Symbol | |
ID | 8568228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 1833065 |
End bp | 1833604 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | 2'-5' RNA ligase |
Protein accession | YP_003290851 |
Protein GI | 268317132 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGCGTC TGTTTGTTGC ACTGGACCTG CCGGAAGATC ATCGCCGCCG GCTCTATGCC CTGCGCGATC CCTCCTGGAA AGCACGCTGG GCCACGCCGG ACCAGTTTCA CCTGACGTTG CGCTTTCTGG GTCCCGTCGA GGAAGACCTG CTACCTGAGC TCACGCGGAC GCTGGCCGAA ATCGAAGCCC CGGCCTTCGA ACTGGCGCCC CGGGGCCTGA TGGTCCTGCC CTCCCTGACC CGTCCGCGCG TGCTGGCCGC GGCCGTCGAT CCAGTGCCGG AACTGCACGC GCTGCAGGCC GAAATCGAAC GGCGCGTGGT CGATCTGGGT TTTACGCCGG AAGATCGGCC GTTCCGGCCG CACATCACGC TGGCCCGCCT GAAGCAGGTC CCGACCGCCG CCGTACGGTC GTTCCTGCAG CGACATCGCG ACTTTGCGCT GACGCCGTTT CCGGTGCGGG CCTTTCATCT GTACGAAAGC CATCTGCATC CCGATGGGGC ACGCTATGAA ATTCTCCACC GTTTTCCGCT TCAGCCTTAA
|
Protein sequence | MLRLFVALDL PEDHRRRLYA LRDPSWKARW ATPDQFHLTL RFLGPVEEDL LPELTRTLAE IEAPAFELAP RGLMVLPSLT RPRVLAAAVD PVPELHALQA EIERRVVDLG FTPEDRPFRP HITLARLKQV PTAAVRSFLQ RHRDFALTPF PVRAFHLYES HLHPDGARYE ILHRFPLQP
|
| |