Gene Rmar_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1542 
Symbol 
ID8568194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1798450 
End bp1801146 
Gene Length2697 bp 
Protein Length898 aa 
Translation table11 
GC content65% 
IMG OID 
ProductDNA mismatch repair protein MutS 
Protein accessionYP_003290817 
Protein GI268317098 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.883963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCCA GGGAAGCGGA GAAACAGGTG GGGCAGACGC CGCTCATGCG GCAGTACTAC 
AAGATCAAGT CCCGCTATCC GAACGCCATC CTGCTGTTTC GGATGGGGGA CTTCTACGAG
ACCTTCGACG AAGACGCGCA CATCGTCAGC CGCGTGCTGG GCATCACGCT GACGAAGCGG
TCCAACGGCC AGGCGGCCGA CGTGCCGCTG GCGGGCTTTC CGCACCACGC ACTGGACAAC
TACCTGCCGA AGCTGGTGCG GGCCGGCTAC CGGGTGGCCA TCTGCGAGCA ACTCGAAGAT
CCCAAATTCG CCCGCAAGGT CGTCAAGCGC GACGTCGTCG AGGTCGTCAC CCCGGGCGTC
TCGTTCCACG AACACCTGCT CGATCCCAAA CGGGCCAACT ACCTGGCCGC CGTGGTCTGG
GGCACCGAAC GAGGCGAGCG TGACCGTATC GGCTTTGCCT TTCTCGATGC CTCGACGGGC
GAGTTTTCAG TGACGGAGGC GCCGGCCCAT CGCCTGGAAG ATCTGCTGCA GACGATCCAG
CCGGCCGAGG TGCTCGTCGA TAAACGCCAG CGTGACCGGC TGCAGGGCGT GCGGGGCCTT
TCGTTTGTCG TTACGCCCCA GGAAGACTGG GTCTTCAGCT TTGACTATGC CTACGAAGTG
CTGCTCCGGC ACTTCAAGAC GCACTCGCTC AAGGGCTTTG GCGTCGATGA CCTGCGGCTG
GGACTCCAGG CGGCCGGAGC AGCCCTGCAC TACCTGGGCG AGACGCAGAA GGGCCGGCTG
CCCCACGTGC GTCGGCTGAC GCGCTACGTC ACCGACGAAT ACATGGTGCT CGATCCGCAG
ACGAAGCGCA ACCTGGAGCT GGTCGCCTCG CTGCAGGACG GTACGCAGGA AGGCTCGCTC
GTACAGATCC TCGACGAGAC GCTCACGCCG ATGGGCGGGC GACTGCTCCG GCGCTGGCTG
CTGCGGCCGC TCAAAAACGT GCGCCAGATC GAAAAGCGCC TGGATGCCGT CGAGGCGCTC
GTGCGCGACC GCCGACTGCG CGAACGCCTG CGCGAAGAGC TGCGCCAGGT GGGCGACCTG
GAGCGGCTGG CCGCCCGCGT CTGCACCGGA CGTGCCACCC CGCGCGACCT GATGCACCTG
CGGCTGACAC TCGAGCAGAT TCCCCCCATC AAGCAGGTGC TCGCCGACGT GTCCTGCGAC
ACGCTGCGCC GCCTGGCCGA ACAGCTCACG CTCTGTACGC AGGTGGTCGA GCGCATCCGC
CAGGCGCTTG TCGATGATCC GCCGGCCTCG CTGAGCGACG GTGGCGTGAT CCGCGACGGC
TTCAGCGCCG AGCTGGATGA ACTGCGCGAG ATCGCCCGCT CCGGTAAGGA CTTCATCGCT
CGCCTGCAGC AGAAAGAGAT CGAGCGCACG GGCATCCCGT CGCTCAAGGT GGGCTTCAAC
AAGGTGTTCG GCTATTACAT CGAAGTCACC AACGCCCACC GCAACAAAAT CCCGCCGCAT
TACATCCGCA AGCAGACGCT GGTCAATGCC GAGCGCTACA TCACGCCGGA GCTGAAAGAG
TACGAGGAAA AAATTCTCTC GGCCGAGGAG AAGATCGCCA GCCTGGAGGC CGAGTTGTTC
AACCGGTTGC GTCTGGAGGT GGCCGAGGCG ACGGCCGAGC TGCAGCTCAA CGCGTCGCTG
CTGGCCATGC TCGATGTGTT CTGCAGCCTG GCCGAAGTGG CCGATCGTTA CGGCTACACG
CGACCGGAAC TGCACGAGGG CACCGAGCTG CTCATCGAAG AAGGCCGCCA TCCGGTGGTC
GAGCGTACGC TACCGCCCGG CGAGCCGTTC ATCCCGAACG ACATCTACCT CGACACGCAC
GCGCAGCAGA TCCTGATCAT CACGGGACCG AACATGGCCG GCAAGAGCGT GGTGCTGCGC
CAGACCGGCC TGATCGTACT GCTGGCGCAG ATCGGTTCGT TCGTGCCGGC CCGCCGCGCC
CGCATCGGGA TCGTCGATCG CATCTTCACG CGTGTGGGCG CTTCGGACAA CCTGGCCGCC
GGCGAGAGTA CGTTTCTCGT CGAAATGAAC GAGACGGCCA ACATTCTCAA CAATGCCACG
CCGCGCTCGC TGATCCTGCT CGACGAGGTG GGGCGGGGTA CTTCGACGTT CGACGGGCTG
TCGATCGCCT GGGCGCTTGT CGAGTACCTG CACGAGACGC CCTCGGTGGC CGCGCGCACG
CTGTTCGCCA CGCACTACCA CGAACTGAAC GAACTGGCCG AACGCTTCCC GCGCGTGAAG
AACTTCCGCG TGCAGGTCGA GGAGCACGAC GGCCGGGTGA TCTTTCTGCA CAAACTGGTG
CCGGGCGGGG CCGACCATTC CTACGGCATC GAGGTGGCCC GCATGGCCGG ATTGCCCGAG
CCGGTCATTG CGCGCGCCCG TGAGATCCTG CGCCATCTGG AGGCGCAGCA CCTTGTGGTC
GAAGCACCGG CCGGCGACGG CGAGCCCGTG CGTCCCGTGC GGGCACGACG GGCCGAACGC
ATTCCCGCCG ACACGTCGGC CTTCCAGCTT TCGCTCTTTG CGCAACCCGA GCCCGATCCG
GTTGCCGAGG AGCTCAAAGA GCGGCTGCGC CGGATCGATC CCAACCGCAT GACGCCCATC
GAGGCCCTGC TCCTGCTCGA CGAACTCAAG CGGCTTGTGG AACGCCATGA TTCGTGA
 
Protein sequence
MASREAEKQV GQTPLMRQYY KIKSRYPNAI LLFRMGDFYE TFDEDAHIVS RVLGITLTKR 
SNGQAADVPL AGFPHHALDN YLPKLVRAGY RVAICEQLED PKFARKVVKR DVVEVVTPGV
SFHEHLLDPK RANYLAAVVW GTERGERDRI GFAFLDASTG EFSVTEAPAH RLEDLLQTIQ
PAEVLVDKRQ RDRLQGVRGL SFVVTPQEDW VFSFDYAYEV LLRHFKTHSL KGFGVDDLRL
GLQAAGAALH YLGETQKGRL PHVRRLTRYV TDEYMVLDPQ TKRNLELVAS LQDGTQEGSL
VQILDETLTP MGGRLLRRWL LRPLKNVRQI EKRLDAVEAL VRDRRLRERL REELRQVGDL
ERLAARVCTG RATPRDLMHL RLTLEQIPPI KQVLADVSCD TLRRLAEQLT LCTQVVERIR
QALVDDPPAS LSDGGVIRDG FSAELDELRE IARSGKDFIA RLQQKEIERT GIPSLKVGFN
KVFGYYIEVT NAHRNKIPPH YIRKQTLVNA ERYITPELKE YEEKILSAEE KIASLEAELF
NRLRLEVAEA TAELQLNASL LAMLDVFCSL AEVADRYGYT RPELHEGTEL LIEEGRHPVV
ERTLPPGEPF IPNDIYLDTH AQQILIITGP NMAGKSVVLR QTGLIVLLAQ IGSFVPARRA
RIGIVDRIFT RVGASDNLAA GESTFLVEMN ETANILNNAT PRSLILLDEV GRGTSTFDGL
SIAWALVEYL HETPSVAART LFATHYHELN ELAERFPRVK NFRVQVEEHD GRVIFLHKLV
PGGADHSYGI EVARMAGLPE PVIARAREIL RHLEAQHLVV EAPAGDGEPV RPVRARRAER
IPADTSAFQL SLFAQPEPDP VAEELKERLR RIDPNRMTPI EALLLLDELK RLVERHDS