| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1526 |
|---|
| Symbol | |
|---|
| ID | 8568177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 1778748 |
|---|
| End bp | 1779809 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_003290801 |
|---|
| Protein GI | 268317082 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.291045 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGA AACGGGTGCG ACTGGCCGAC ATTGCCGAGC GGCTGAATCT GAGCAAGGTC
AGCGTCTCGA AAGCGCTTCG CGATCACCCG GACATTTCCA AGGAAACACG CGAGCTGGTC
AAGAAGACGG CCGCCGAGAT GGGCTATTTG CCTAATCTGC TGGCCCGGTC GCTTTCGTCC
CGGCGTTCCT ACACGCTGGG CGTGGTCGTG CCGAAGATCG CGCACGCGTT CATGGCCACG
GTGGTCGATG CCATTCAGGA GACGGCCACG CAGCGGGGCT ACGGCATTGT GTTGGCCGTC
TCGCAGGAGC GGGCCGATCT GGAGCGGCAG CACATCGAAC GCCTGCTGGC CATGCGCGTC
GACGGGCTCC TCGTGTCGGT CTCGCAGCAG GAGCCCCATC TCGAAGTGTA CGAGCGGGTG
CGGCAGATGG GCGTGCCGCT CGTGTTTTTT GACCGCGCGA TCGAAGGGCT GGGATTCAGC
AGCGTGATCG TGGATGACCG GGAAGGGGCC TACCGGGCCA TCGAGTACGT GATCCGCAAG
GGATACCGGA AGATTGCGCA TGTGGCGGGC ACTTCGGAAG TGCTCATCGG CCGTGAGCGT
CGGGCCGGCT ATGAGGCCGC CCTTCGGGAT GCCGGCCTTC CGATCCGGCC GGAATGGATC
ATCGAAGGCG GATTCGACGA GTGGCATGGC TACTACGCCT TCAAGCGGCT GCTGCAGGGC
AAAGAGTTGC CCGAAGTGAT CTTTGCCGTT ACGTTCCCGG TCGAGCTGGG CATTCGGGCG
GCCATGCGCG AGACCGATCC GTCGCTGCTG GAGCGCATTC AACTGATTTC GTTCAGCGAA
GGCGGTCTGA ACGAATTCTA CGTCTATCCG CACATCTGCG TCCGGCAGCC GGCCCGCGAG
ATCGGCCGTC GGGCTGTGGA AATGCTGATC GAAGAAATCG AAAGCGAAGA CGGGATCCAG
CCGCGCCAGG TCGTGCTCAA GACCGAGCTG ATCACGCCGG AAGACTACCT CCGGCGCTTT
GCCGTGCGGA TGGCCACCGA GCGCTCGCTG GCGGCCGACT AA
|
|---|
| Protein sequence | MAKKRVRLAD IAERLNLSKV SVSKALRDHP DISKETRELV KKTAAEMGYL PNLLARSLSS
RRSYTLGVVV PKIAHAFMAT VVDAIQETAT QRGYGIVLAV SQERADLERQ HIERLLAMRV
DGLLVSVSQQ EPHLEVYERV RQMGVPLVFF DRAIEGLGFS SVIVDDREGA YRAIEYVIRK
GYRKIAHVAG TSEVLIGRER RAGYEAALRD AGLPIRPEWI IEGGFDEWHG YYAFKRLLQG
KELPEVIFAV TFPVELGIRA AMRETDPSLL ERIQLISFSE GGLNEFYVYP HICVRQPARE
IGRRAVEMLI EEIESEDGIQ PRQVVLKTEL ITPEDYLRRF AVRMATERSL AAD
|
|---|
| |