| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1517 |
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| Symbol | |
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| ID | 8568168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | + |
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| Start bp | 1768432 |
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| End bp | 1771434 |
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| Gene Length | 3003 bp |
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| Protein Length | 1000 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | outer membrane assembly lipoprotein YfiO |
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| Protein accession | YP_003290792 |
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| Protein GI | 268317073 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.261003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCGCA TCATCGGGCG GCTCTGCACG CTGAGCCTGT TGTTCTTCGG ACCTGTGGCA
CTGCAGGCGC AGCCTGCGCC GCCGGGTCCG GCCGTTTCGT TCGCCCATGC CCTGGCGCTG
CACAGCGACG GATTCTACAC GCTCTCGGCC CAGACGTTTG CGCAGTTTCG GAGCACGTAC
CCGGACGATC CGCGGGTCCC CGAGGCGCTG TTTTACGAAG CCGAGGCGCG GCTGGCACTG
GGACAGACCG ACGAGGCGGC CGCCCTGCTC CGCGTGTTCG CCGCCCGCTA CCCGACGCAT
CCGCTGGTCT ACGAGGCCCA GCTTGCCCTG GGCAAGTACT TTTTCGATAC CGGGCGCTAT
GACGACGCCC GCCAGGCCTT CGGCCAGGCG CTGCGTCCCG GCGTGCCCGC CACTCAGGCT
GCCCGAGCGC TGTTCTGGAT GGCCGAGTCG GCGCAACGGC TGGGACGTCC GGCCGAGGCC
ATCGGCTACT ATCGGCGGCT GGCCGACACG TACCCGAACA CGCGGCTGGC CCCACAGGCG
CTGCTGGCAA TGGCTTACAC GCAGGTGGAG ATGGGCGCCT ACGACGAGGC CGCCCGCACC
TTCGAAGTGC TGGCCGCACG CTACCCCGCC GCCCCGGAAG CCCGGGGACT GGGTCTGGCG
CTGGCGCAGG TTTACTACGA GCTGGGCGAC TACCGCCGTG CCATCGACGA AGTGCAACGT
CGCCTGCCCG ACCTGAAAGG CGAGGCGCAG CAACAGGCCT GGCTACTGCT GGCCGAGTCC
TACAACCAGC TCCGCGACAG CGAAAACGCC ATCGTCTACT ACCGTCGCGT ACTGGAAGAC
CCCGACAGTC CCTACTACCG CCGGGCGCTC TACGGTCTGG CGTGGAATTA CTACTTCGAG
GGTGTTTACC AGTGGGCGGC CGACCATTTC CGCCAGGTGC GCGAAGGCCG GCGCGACACG
CTCGCCATGA AGGCCACTTA CTACGAGGCG GTCTGTCGCA AGCTGGCCCG CGAGCCGCAG
CAGGCACTGG AGCTGTTCCG GACTGTCGTG CTCGAATGGC CCGACAGTCC GCTGGCCCCC
CACGCCCAGT ACGAACTGGC CCTGCTGCTC TACGAAATGC GACGGTGGGA AGAAGCGCAT
GACGCGTTCG ACTTTCTCGT GCGCACCTAC CCCGACAGCG AACTGCTCGG CGACGCGCTC
CGGATGCGCG GCTACACGGC CATCGCGCTC GGCCACTTCG ACGAAGCCTA CGAGAGCTTC
GACCGCGCCG TGGCCCTACA GGCCGCCTCG CCACAACTCC GCACCGAGAT CGCCTTCCAG
AAGGCCTGGC TTCAGTACCG CCAGCAGAAC TACGCGGCCG CCAGCGAGGC CTTTCTGGAA
CTGTACCGTC AGGATCCACG AGGCCCTAAA GCCGGCGATG CCCTTTTCTG GGCGGCCGAA
AGCTTCTACC AGCTGGGCCG GCTCGACCGC GCCGAAGCGC TCTTTCGCGA CTACCTCCGG
AGTTTTCCCG ATGGCGCCCA CGTCGAAGCC GCCCACTACG CGCTGGGCTG GGTCTATTTC
CGCCAGCAGC GCTACGAAGC CGCCATTCAG GCCTTCCAGC AGTTTCTGCG GGCCTATCGC
CGCACCGAAG AGGCGGTCCC CTACCGGCTC GACGCGCTGC TCCGGCTGGC CGACAGCTAC
TACGCGCTCA AGCGCTATCC CGAGGCCATC CGCTACTATC GCCAGGCGGC CGCCGAAGGC
GAAAGCGACT ATGCGCTCTA TCAGATCGGC CAGGCCTACT ACAACGCAGG CAACTACGAG
GAAGCCCTGC GCACCTTCAA CCGATTGCTG GAAGAACACC CCGAAAGCAC CTGGCGCGAG
GAGGCGCTCT ACCAGATCGG CTACATCCAT TTCCTGAACC AGGAATACGA TCAGGCCATC
GCGGCCTACC GGCGGCTGCT CGAACTGGCC CCGAACGATC CGCTGGCCGC CAAGGCGCAG
TACGGCATCG GCGACGCGCT CTTCAATGCG GGACGCCTGG AAGCGGCCGT CAACGCCTAC
AAACGCGTGC TGGAGCGCTA TCCGCAGAGT CCGTTCGTGG CCGACGCCGC CACCAGCATC
CACTTTGCGC TGATCGCCGC CGGCAACGAA GCGCGCGCGC AGGCGCTGAT CGATTCGTTC
GCCACGGCCT ACCCGGACAC GCGCATCGTG GACGAACTGC GCTTTCGGCG GGCCGAGGCA
CTCTACCGCA GCGGCCGCTC CGAGGAGGCC ATCCGGGCAC TCGAAGCCTT CGTGCGCGGG
AGCCATGCGC CGGACCTGAT GGGCGAGGCG CTTTACTACC TGGCCACGCT CTACGCAGAA
CAGGAACTGT ACGACGAGGC CGAGCGCACG CTGCAGCAAC TGCTGGCCGC CCATGCCGAG
CACCGAAGGA TGCCCGAAGC ACTGCTCCTG CTGGGTAATG TCCAGCTGAA GCAGGAGCGC
TACGAAGCCG CCCTGGTGAG CTTCCGGCGC CTGGCGTCAA TGGCACCGGA GCGCTCCGAG
CTGCTGGCCC GTGCCCTCTA CGGCCAGAGC GTCGCCCTGC TGGAGCTGGG CCGCTTCGCC
GAGGCACGCC AGGCGCTCAC AGAAGCACAG GCGCGTTTTC CGGAAGATGG CCAGCCCGCC
ATCCTGCTGC TCGGGCAGGC ACGCCTGGCC GAGGCCGAGG GCCGTCCGGA CGAAGCGGAG
CGCCTCTACC GGGCGGTGGT CGGTCGCGCC CAGGACGAAG CCGGTGCCGA GGCGCTCTAT
CGCCTCGGGG AACTGCTGCT ACGCCGGGGC GACCCGCATC GGGCCATCGA AGAGCTGAGC
CGTCTGCCCA CACTCTTCCC GGGCTATCCA GAATGGCTGG CCCGTGGCTA TCTGGCCCAG
GCGCGGGCCT TCCTTGCGCT CGGACAGCGC GGCGAGGCCA CCCGCCTTTA TGATCTGGTC
ATCACCGAAT TTCCCAACAC GTCGTTTGCC CGCATTGCTG CCCAGGAAAA AGCCCGGTTG
TAA
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| Protein sequence | MLRIIGRLCT LSLLFFGPVA LQAQPAPPGP AVSFAHALAL HSDGFYTLSA QTFAQFRSTY
PDDPRVPEAL FYEAEARLAL GQTDEAAALL RVFAARYPTH PLVYEAQLAL GKYFFDTGRY
DDARQAFGQA LRPGVPATQA ARALFWMAES AQRLGRPAEA IGYYRRLADT YPNTRLAPQA
LLAMAYTQVE MGAYDEAART FEVLAARYPA APEARGLGLA LAQVYYELGD YRRAIDEVQR
RLPDLKGEAQ QQAWLLLAES YNQLRDSENA IVYYRRVLED PDSPYYRRAL YGLAWNYYFE
GVYQWAADHF RQVREGRRDT LAMKATYYEA VCRKLAREPQ QALELFRTVV LEWPDSPLAP
HAQYELALLL YEMRRWEEAH DAFDFLVRTY PDSELLGDAL RMRGYTAIAL GHFDEAYESF
DRAVALQAAS PQLRTEIAFQ KAWLQYRQQN YAAASEAFLE LYRQDPRGPK AGDALFWAAE
SFYQLGRLDR AEALFRDYLR SFPDGAHVEA AHYALGWVYF RQQRYEAAIQ AFQQFLRAYR
RTEEAVPYRL DALLRLADSY YALKRYPEAI RYYRQAAAEG ESDYALYQIG QAYYNAGNYE
EALRTFNRLL EEHPESTWRE EALYQIGYIH FLNQEYDQAI AAYRRLLELA PNDPLAAKAQ
YGIGDALFNA GRLEAAVNAY KRVLERYPQS PFVADAATSI HFALIAAGNE ARAQALIDSF
ATAYPDTRIV DELRFRRAEA LYRSGRSEEA IRALEAFVRG SHAPDLMGEA LYYLATLYAE
QELYDEAERT LQQLLAAHAE HRRMPEALLL LGNVQLKQER YEAALVSFRR LASMAPERSE
LLARALYGQS VALLELGRFA EARQALTEAQ ARFPEDGQPA ILLLGQARLA EAEGRPDEAE
RLYRAVVGRA QDEAGAEALY RLGELLLRRG DPHRAIEELS RLPTLFPGYP EWLARGYLAQ
ARAFLALGQR GEATRLYDLV ITEFPNTSFA RIAAQEKARL
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