Gene Rmar_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1338 
Symbol 
ID8567988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1565084 
End bp1566328 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content61% 
IMG OID 
Productprotein of unknown function DUF214 
Protein accessionYP_003290615 
Protein GI268316896 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCCGAC GCCTGTATTT CGAGCTTTTT GTCGCGCTGC GCTACCTGCG CGGGGCGCAG 
GGACGCGAGG AGGGTCGCCG GTTTCTTCGC TTTATCACTT ACATTGCCAT CGGTGGAGTG
ACCGTTGGCG TCGCCGCGCT GCTGCTGGCG CTGTCCATCG TGCACGGCTT CAGTCGGGAG
ATCGAAGCCA AGATCACCGG TTTCGGCGCG CACATCCAGG TAGAAAATCT TCGTGATGCG
CCGCTTTCGG ACGCCGCCTG GATGGAAACC GCCCTGCAGC ACATGCCCGG CGTGGTCTCC
GTCCGCCCGG TCATCCAAGA GTTCGTCCTG ATCCGACGGG GGCGCCGCGA AGTGGACGGT
GTCGCTCTGT GGGGTAGTCC GACGCTCCCG GAATACCTGC AACAGCACCT GGTGGCCGGC
ACGGCACGAT TTACACCTGA CAGTCTCGGA CGTCCCGGAC TGATTATCGG ACGCCAGCTC
GCCGAACAGC TCGGCCTCAA GGTTGGCGAT CTCGTCACGC TTTTTTCTAT GCGTCGGCTA
CCGTCCTCGG TCCGTCCCCG CGTGCGCGTA CGCCAGTTCT ACGTGGCCGG CCTGTACGAG
ACGCTCCTGG CCGACTTTGA CCAGCTCTAC GTCTTTACTT CTCTGGACGC CGCCCGTGCC
CTGCTGGAAT ACGGTCCCGA CGAAGTGACC CGCTTTGACC TCACGCTACA GAACGTGCAG
GACGCGCTGC ACATTGCCCG ACAGATCGAG GACCACTTTG GCCTGCCCGT CATCGCCCGC
ACCATCTATG AAGTATTTCG CAATCTTTTC GCCTGGGTTC GCCTGCAGGA AAGCATCATT
CCGCTGGTTA TCAGTATCAT TATCATCGTC GCCGCCTTCA ACATGCTGGC TACCCTGCTC
ATGGTCATTC TGGAGAAAGC CCGCGAAATC GGCATTCTGG CCAGCATGGG GGCATCTCGG
CGAAGGCTTC AGCGAATGTA CCTGATCCTG GGTCTGCTGA CCGGACTGGT CGGAACCGCC
CTGGGCGAAC TCCTGGCGCT CAGTCTGGCG CTCCTGCAGC AAAAGTTCGG AATCATTCCA
CTGCCTGCCG AGGCCTACTA CATGCGAACG GCACCGATCG CCCTGCAGAC CGTAGATTTT
ATCCTGGTTG CCGTCGTGAC GGTGGGGCTC TGTGGACTGG CCTCGCTGAT ACCGGCCCGC
ATTGCCGCCC GCATGAACCC GATTCAGGTG ATTCGTTTTC ACTGA
 
Protein sequence
MLRRLYFELF VALRYLRGAQ GREEGRRFLR FITYIAIGGV TVGVAALLLA LSIVHGFSRE 
IEAKITGFGA HIQVENLRDA PLSDAAWMET ALQHMPGVVS VRPVIQEFVL IRRGRREVDG
VALWGSPTLP EYLQQHLVAG TARFTPDSLG RPGLIIGRQL AEQLGLKVGD LVTLFSMRRL
PSSVRPRVRV RQFYVAGLYE TLLADFDQLY VFTSLDAARA LLEYGPDEVT RFDLTLQNVQ
DALHIARQIE DHFGLPVIAR TIYEVFRNLF AWVRLQESII PLVISIIIIV AAFNMLATLL
MVILEKAREI GILASMGASR RRLQRMYLIL GLLTGLVGTA LGELLALSLA LLQQKFGIIP
LPAEAYYMRT APIALQTVDF ILVAVVTVGL CGLASLIPAR IAARMNPIQV IRFH