Gene Rmar_1308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1308 
Symbol 
ID8567958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1533918 
End bp1535183 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content63% 
IMG OID 
ProductNusA antitermination factor 
Protein accessionYP_003290586 
Protein GI268316867 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.17701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAACA GCGAGCTGGT ATCTTCCTTT GCGGAAATCG CGCACTCGAA GGGAATCGAC 
CGGGATACGC TCCAGCTGAT CGTGGAGGAC GTCTTCCGGG CCATGATCCG GAAGCGTTAC
GGCTCGGACG AAGCGTTCGA GATCATCTTC AACCCGGATC ATGGCGACAT CCAGATCCTC
CACATCCGGG AAGTCGTGCC CGACTGGGAG CTGGAAGACC CGGTCACGCA GATTGAGCTG
AGCGAAGCGC GCAAGATCGA CCCCGATTTT GAGGTCGGCG ATGAGGTAGC CAGCGAGGTG
AACATCGCCG AGTTCGGTCG GCGGGCCATC ATGACCGCGC GCCAGACCTT CAGCCAGCGT
ATTCGCGATT TGGAGAAGGA AAAAATCTAT CAGGAATATT CCGAACTGAT CGGCGAGATC
GTCGTCGGCG AAATCTATCA GATTCGCCGG CGCGAGGTGC TGGTCATGCA CAACCGCACG
GAGCTGATTC TACCGCGCGA GGAGCAGATC CCGCGCGATC GTTACCGCAA GGGCGACACG
CTCCGGGCGA TCGTCAAAGA GGTGCGTCGT GAGGCGGGCG GTGCGCCGCA GGTGATCATC
AGCCGGGCCG ATCCGGTCTT CCTGGAGCGG CTGCTGGAGC TCGAAGTGCC CGAAATCGAA
GAGGGGATCG TAGAGGTCAA GAAGATCGTG CGGGAGCCCG GCGAGCGCGC CAAGGTGGCC
GTCGTCAGCC ACGACGAGCG GGTGGACCCA GTGGGCGCCT GCGTGGGTCT GCGGGGGAAC
CGGATCCATG CCATCGTGCG CGAACTCTCC AACGAGAACA TCGACGTCAT CGAGTGGTCC
GACGACCCCC GGGAGCTGAT CAAGCGGGCG CTGACGCCGG CCAGACCGCT TTCGGTCACG
TTGAACGAAG AGGCCAACCC GCCGCGTGCC AAGGTGGTCG TGCGGGCCGA CGAGGTCAGC
CAGGCCATCG GGCGGGGCGG GGTCAACATC CGGCTGGCCT CGCGGCTGAC CGGCTATGAA
CTGGACGTCT ACCGGGAAAT CCGCCCCGAC GAAGAGGATA TCGAAATCGA AGAGTTTGCC
GACGAGTTGG ACGAAGAGAT CATCGCGCGG CTGCGCGAGA TCGGTTGCGA TACGGCCCGG
GCCGTGCTCG ACCTTTCGGT CGAAGAGCTG ATGCGGCGCT CCGGGCTCGA TGCCGAAACC
GCGCGGCGCG TGATGCATGT CATTCGTTCG GAATTTGAAG AAGACGAAGA AGAACTGGAA
GGCTGA
 
Protein sequence
MQNSELVSSF AEIAHSKGID RDTLQLIVED VFRAMIRKRY GSDEAFEIIF NPDHGDIQIL 
HIREVVPDWE LEDPVTQIEL SEARKIDPDF EVGDEVASEV NIAEFGRRAI MTARQTFSQR
IRDLEKEKIY QEYSELIGEI VVGEIYQIRR REVLVMHNRT ELILPREEQI PRDRYRKGDT
LRAIVKEVRR EAGGAPQVII SRADPVFLER LLELEVPEIE EGIVEVKKIV REPGERAKVA
VVSHDERVDP VGACVGLRGN RIHAIVRELS NENIDVIEWS DDPRELIKRA LTPARPLSVT
LNEEANPPRA KVVVRADEVS QAIGRGGVNI RLASRLTGYE LDVYREIRPD EEDIEIEEFA
DELDEEIIAR LREIGCDTAR AVLDLSVEEL MRRSGLDAET ARRVMHVIRS EFEEDEEELE
G