Gene Rmar_1292 details

Gene Information

• Locus tag: Rmar_1292
• ID: 8567942
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 1515517
• End bp: 1517679
• Gene Length: 2163 bp
• Protein Length: 720 aa
• Translation table: 11
• GC content: 63%
• Product: ribosomal protein S1
• Protein accession: YP_003290570
• Protein GI: 268316851

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGACG AACAGAAGCA GGAACAGGCA ACCCAGGTCT CTGAAATGCC AGAGACGCCC 
GAAAAACCGC AGGAGGAAGC ACCGCAGCCT GAAGCAGAAA CGGCTACGAC ACCCGAAGCG 
GCCCAGCCTG AGGCCGCCGA AACACCGGAG GCCACCGGGG CTCCGGTAGC CGAGGCCGAA 
GCCGAACCGG AGCCTGTGGC TGAAGCCCCG GCGCAGAAGA CGCGTCCGGT CCTTGGCTTC 
AAGGGCGAGA TCACCGGCCC GGTCGTGAAG CTGGAAGACC TTGAAAAGCA GCAAGAAGCG 
CGCGAGGTCG ATCCCTTCCA CGAGCAGCTC CTCCGGCAGA TCGAAGAGAG CTTCACGACC 
GTTAACGAGG GCGAGATCGT CAAGGGCCGC ATTCTGGCCG TCGGCGAGAA GGAGGTCATC 
ATCGACATCG GCTTCAAGAG CACCGGCATC GTCTCGCGCA ACGAGTTTGG CGACGCGGAG 
ATCAAGCCGG GCGACGAGGT AGAGGTCTTC GTCGAAAGGC TGGAGGACGC GCAGGGTCAG 
CTCGTGCTGT CGAAGCTCAA GGCCGATCGC GTCCGGCGCT GGGAGCGTGT CGAGGACGCC 
TACTACAACG AAAAGGTCAT CGAGGGTACG ATCGTGCGCC GCGTCAAGGG CGGCATGATC 
GCCGAAATCT TCGATGGCCT GGAAGCCTTC CTGCCGGGTT CTCAGATCGA CGTGCGGCCC 
GTGCGCGACT TCGACGCCTA CATCGGCAAA CGCATGGAGT TCAAGATCGT CAAGATCAAC 
CCGGCCAACG AAAACGTCGT CGTCTCGCAC CGGGCCCTGC TCGAGAAAGA GCTCCAGAAG 
CAGCGCGAGG AGATTCTCTC GAAGATGGAG CCCGGTCAGG TGCTCGAAGG CACCGTCAAG 
AATATCACGG ACTTCGGCGT CTTCATCGAC CTGGGCGGCG TCGACGGCCT GCTGCACATC 
ACGGACCTCT CCTGGGGTCG CGTTTCGCAT CCGTCGGAAC TGGTGCAGCT CGGCCAGAAG 
CTCAACGTCG TCGTCCTCGA CTACGACAAG GAGCGCCAGC GTATCTCGCT GGGTCTGAAG 
CAGCTCCAGC CCCATCCCTG GGAGAACATC GACGAGAAGT ACAAGGAAGG CGACGTGGTC 
GAGGGCAAGG TGGTCTCCAT CACGGACTAC GGCGCCTTCG TCGAGCTGGA GAAGGGGATC 
GAGGGGCTGG TGCACATCTC CGAGATGAGC TGGACCGACC ACATCAAGCA CCCGAGTCAG 
AAGGTCTCGC TTGGCCAGCT CGTCAAGGTG AAGATTCTGA ACATCGACCG CGAGGGCCGG 
AAGATCTCGC TCGGCATGAA GCAGCTGGAG CCCAACCCGT GGGAGGGGCT CTCCAAGCGC 
TACCCGCCGG GCACGGTGCT GCGCGGCAAG GTCCGCAAGA TCACCAACTT CGGCGTCTTC 
GTCGAGATCG AGCCGGGCAT CGACGGACTC GTCCACATCA GCGACCTGTC GTGGACGCGC 
CGCATCCAGC ACCCGAGCGA AGTGGTCAAG GAAGGGGAGG AGCTGGATGT CGTGGTGCTG 
GAGGTCGATG AGGAAAACCG GCGCATCTCG CTGGGCCACA AGCAGGTGCA GACGAACCCG 
TGGAACGACT TCGCCACGGT CTATGCGGAA GGCACCGACC ATAAGGCCAG AGTGGTGCGG 
ATTGAAGACA ACGGTCTGGT GGTCGAGCTT CCGCTGGGCG TCGAGGCCTT CGTGCCGGCC 
GGCGAGCTCA AGCACAGCAA GAACTTCCAG GAGTTCTACC ACGTGGGAGA CGAGCTGGAG 
CTGCGCGTGG TCCGTTTCAG CGCCGCCGAC CGGGAGATCG TCATGAGCGA GGTGGCCAAG 
GAGCGCGCCG AAGAGGAGGC GCAGCGGGCC GAAGAGGAAC GGCGTCGCCG CGAAGAGCGC 
AAGCAGCAGG AAAAGGCCGT CAAGGAGTAC CAGCGCAAGG CGGTCACCGG ACCCACCACG 
TTGGGTGAGC TCAGCGGCCT GGAAGACCTG AAGGCACAGC TCGAAGCGGC CGAGAAGGCG 
GCGCAGGAGG CATCGGCCGA GACGGAAGAA GCTCCCGAAC AGCCGGCCGC CGAGGCGCAG 
GCCCCTGAGG CCGAAACCGG GGAAGAGCCT TCGGACGAGA CCTCCGAAGA CAAGAAAGAC 
TGA 

 

Protein sequence

MADEQKQEQA TQVSEMPETP EKPQEEAPQP EAETATTPEA AQPEAAETPE ATGAPVAEAE 
AEPEPVAEAP AQKTRPVLGF KGEITGPVVK LEDLEKQQEA REVDPFHEQL LRQIEESFTT 
VNEGEIVKGR ILAVGEKEVI IDIGFKSTGI VSRNEFGDAE IKPGDEVEVF VERLEDAQGQ 
LVLSKLKADR VRRWERVEDA YYNEKVIEGT IVRRVKGGMI AEIFDGLEAF LPGSQIDVRP 
VRDFDAYIGK RMEFKIVKIN PANENVVVSH RALLEKELQK QREEILSKME PGQVLEGTVK 
NITDFGVFID LGGVDGLLHI TDLSWGRVSH PSELVQLGQK LNVVVLDYDK ERQRISLGLK 
QLQPHPWENI DEKYKEGDVV EGKVVSITDY GAFVELEKGI EGLVHISEMS WTDHIKHPSQ 
KVSLGQLVKV KILNIDREGR KISLGMKQLE PNPWEGLSKR YPPGTVLRGK VRKITNFGVF 
VEIEPGIDGL VHISDLSWTR RIQHPSEVVK EGEELDVVVL EVDEENRRIS LGHKQVQTNP 
WNDFATVYAE GTDHKARVVR IEDNGLVVEL PLGVEAFVPA GELKHSKNFQ EFYHVGDELE 
LRVVRFSAAD REIVMSEVAK ERAEEEAQRA EEERRRREER KQQEKAVKEY QRKAVTGPTT 
LGELSGLEDL KAQLEAAEKA AQEASAETEE APEQPAAEAQ APEAETGEEP SDETSEDKKD